Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq54 91.5 2e-13 >seq54 Length=1125963 Score = 91.5 bits (100), Expect = 2e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || | ||| || | |||||| || || || | ||||| || || ||||| Sbjct 982969 CTTGAGTCCTGTGATGTGTGCTATCATGTATGTCAGAAGGGCATAGCTTGCGATATTGAA 982910 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || ||||| || || |||||||| | |||||| | ||||| || || || || || Sbjct 982909 TGGAACACCCAGACCGATATCCCCCGAGCGCTGGTATAATTGGCAAGACAGTTCACCCTC 982850 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 | || || ||||||||||| ||||| || || || ||||| Sbjct 982849 AGAGACATAGAACTGGCACAGAGCATGGCAGGGTGGAAGAGCCAT 982805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583409703204000