Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23]
10,735 sequences; 1,191,242,572 total letters
Query= NC_027016.1
Length=226084
Score E
Sequences producing significant alignments: (Bits) Value
seq10511 84.2 3e-11
>seq10511
Length=4527151
Score = 84.2 bits (92), Expect = 3e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 214082 CGTTTCGCACTGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATT 214141
|| ||||| ||||| ||||| || || || || || || | ||| |||||||||
Sbjct 1120914 CGATTCGCTGTGGGTCACGAGGCCTTCGGTCTGGTCCCTGGCCTGATGATGTACGCCACC 1120855
Query 214142 ATCTGGCTGAGAGAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGG 214201
||||||||||| || |||||| | ||||| ||| | |||| | ||||| || || |||
Sbjct 1120854 ATCTGGCTGAGGGAACACAACCGTGTTTGTGACATCATGAAGGAGGAGCATCCCGACTGG 1120795
Query 214202 AACGACGAACAGCTGTTCCAGATCACTCG 214230
|||| || | | ||||||| ||| ||
Sbjct 1120794 GACGATGAGCGCATCTTCCAGACCACACG 1120766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 723243736706400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |