Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq4474 98.7 1e-15 >seq4474 Length=14602 Score = 98.7 bits (108), Expect = 1e-15 Identities = 88/108 (81%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 59991 GCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCT 60049 || ||||| ||| |||||||||||||||||||| || || || ||| || |||||||| Sbjct 5126 GCCTTTGC-TGCTGTGGAAGGAATCTTCTTCTCAGGTTCTTTTGCTGCCATCTTCTGGCT 5184 Query 60050 CAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097 ||||||| | || |||||||| ||||| | |||||||| ||||| || Sbjct 5185 CAAAAAGAGAGGACTCATGCCTGGCCTTACCTTCTCCAATGAGCTCAT 5232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548451194828400