Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astyanax_20mexicanus_20[refseq_20GCF_5F000372685.1_202013-04-23] 10,735 sequences; 1,191,242,572 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq54 84.2 2e-11 >seq54 Length=1125963 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || ||||| | ||| || ||||||||||||| | ||||| || | ||| || ||| Sbjct 982965 AGTCCTGTGATGTGTGCTATCATGTATGTCAGAAGGGCATAGCTTGCGATATTGAATGGA 982906 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 ||||||||||| || || | || | |||||| ||||||||||| || || || | | Sbjct 982905 ACACCCAGACCGATATCCCCCGAGCGCTGGTATAATTGGCAAGACAGTTCACCCTCAGAG 982846 Query 118654 ACATAAAACTG 118664 ||||| ||||| Sbjct 982845 ACATAGAACTG 982835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414422572834540