Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Austrofundulus_20limnaeus_20[refseq_20GCF_5F001266775.1_202015-07- 28] 29,785 sequences; 866,963,281 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq101 98.7 7e-16 >seq101 Length=1578606 Score = 98.7 bits (108), Expect = 7e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 97123 TGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCC 97182 || |||||||| | || | |||| ||||| || ||||| ||||||||||| || ||| Sbjct 214037 TGTGCGATCATGTAGGTGAGAAGAGCGTAGCTGGCGATGTTGAAAGGCACCCCCAGACCC 214096 Query 97183 ATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGA 97242 || || || || | || || | ||||||||| |||| || ||||| || || |||||| Sbjct 214097 ATGTCGGCCGAGCGCTGGTACAGCTGACAGGACAGCTCGCCGTCACAGACGTAGAACTGA 214156 Query 97243 CTCAATACATGACAGGGGGGCAACGCCAT 97271 | || | || |||||||||| ||||| Sbjct 214157 CACAGAGCGTGGCAGGGGGGCAGAGCCAT 214185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346658115782450