Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Austrofundulus_20limnaeus_20[refseq_20GCF_5F001266775.1_202015-07- 28] 29,785 sequences; 866,963,281 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq226 98.7 8e-16 >seq226 Length=808630 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 115281 TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGT 115340 |||| ||||| ||||||||||| || ||||| || || ||||| ||| | || |||| Sbjct 361572 TAAACATGCAGATTTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTGGAGC 361631 Query 115341 CCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400 |||| ||||| ||| | | || || || || || || |||||| |||| || Sbjct 361632 CCAGTGACACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCTG 361691 Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460 | ||||| || || || | || ||||| || | ||||||| | ||| || |||| | Sbjct 361692 ACCAGCAGAGGCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACT 361751 Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGT 115494 | ||||| || || ||||| ||| | || |||| Sbjct 361752 ACAACATCCAGAAGGAGTCCACTCTCCACCTGGT 361785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425189598134200