Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Austrofundulus_20limnaeus_20[refseq_20GCF_5F001266775.1_202015-07- 28] 29,785 sequences; 866,963,281 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq7633 95.1 1e-14 >seq7633 Length=1847 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 25000 TGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTG 25059 |||| || || || ||||| | || ||||| ||||||| | || |||||| | || Sbjct 1556 TGCAGATCTTCGTGAAGACCCTCACTGGTAAGACCATCACGCTGGAGGTGGAGCCCGATG 1615 Query 25060 ACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAAC 25119 ||| || ||| || |||| || ||| ||||||||||| || || |||||||| | Sbjct 1616 ACAACATAGAGACAGTGAAAGCTAAGATCCAGGACAAAGAAGGCATCCCTCCTGACCAGC 1675 Query 25120 AGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATA 25179 || || | |||||||| || ||||| | |||||| || || || ||| ||| | | Sbjct 1676 AGAGGCTGATTTTTGCTGGGAAACAGCTGGAAGATAGCCGGACCCTGTCCGACTACGACA 1735 Query 25180 TTCAAAAAGAATCCACGCTACA 25201 | || || ||||| || || || Sbjct 1736 TCCAGAAGGAATCAACCCTCCA 1757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433170699904775