Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Austrofundulus_20limnaeus_20[refseq_20GCF_5F001266775.1_202015-07- 28] 29,785 sequences; 866,963,281 total letters Query= NC_008361.1 Length=156922 Score E Sequences producing significant alignments: (Bits) Value seq715 82.4 8e-11 >seq715 Length=171852 Score = 82.4 bits (90), Expect = 8e-11 Identities = 116/161 (72%), Gaps = 3/161 (2%) Strand=Plus/Plus Query 59229 ATCGGCGACAAGTTCTGCAGCGCGATGGCCCAGAAGGGTATATGCGGTATGGTGTTGGCA 59288 |||||||||||||| || || ||||||||||| || | ||| || || | | | Sbjct 108144 ATCGGCGACAAGTTTTGTTCCGGAATGGCCCAGAAAGGCACATGTGGCATAATTTACCCC 108203 Query 59289 CAGGAGGACATGCCTTTCGTGCCGGACAGCGGAATGGTGCCGGATATAATCGTGAATTCG 59348 ||||| || ||||| ||| || |||||||| ||| |||||||||||| | ||| | Sbjct 108204 CAGGAAGATATGCCGTTCA-GC--GACAGCGGTATGACTCCGGATATAATCATCAATCCA 108260 Query 59349 CACAGTATGCCGAGTCGAATGACGGTGAATCAAATGATGGC 59389 || |||| || | |||||||| | || ||||| || || Sbjct 108261 AACTGTATTCCTTCTAGAATGACGATTAACCAAATCATTGC 108301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501835490785200