Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Austrofundulus_20limnaeus_20[refseq_20GCF_5F001266775.1_202015-07- 28] 29,785 sequences; 866,963,281 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq345 435 6e-117 seq54 219 8e-52 seq301 210 4e-49 seq1174 147 4e-30 seq1399 138 2e-27 seq38 113 8e-20 seq74 95.1 2e-14 seq2653 93.3 8e-14 seq558 91.5 3e-13 seq33 84.2 4e-11 >seq345 Length=614307 Score = 435 bits (482), Expect = 6e-117 Identities = 1054/1579 (67%), Gaps = 64/1579 (4%) Strand=Plus/Minus Query 212858 CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTAT 212917 ||| ||||||||||| || ||||| | |||| |||| ||| ||||||||||| || Sbjct 404491 CATCTCCTCGTTCCACAGCCCCCTCTCCGTCAGGTCTTTGAGCAGATGAGGGTTGACGAT 404432 Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 |||||| || || ||||| ||||| | ||| | ||| ||||| | ||||||| Sbjct 404431 CTGGAACTCTCCGGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCGATGGA 404372 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||||||||| ||||| ||||| || ||| || |||||||| || |||| ||| || || Sbjct 404371 CTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATCGGCGCCAGCAGCAGGCT 404312 Query 213038 GTTCCTCACTCCGTGCTCGCCGATGAGGCGCC----GAAGCTCTGCCCAGTCCCATCTGC 213093 ||| ||||| ||||||| | |||| | || | |||| ||||||||| | Sbjct 404311 GTTTCTCACGCCGTGCTTGGCGATCTT-CTCCTTCAGCAGCTT---CCAGTCCCACAGGT 404256 Query 213094 CAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGG 213153 ||| | | |||| | || ||||||||| |||||| |||||| |||| |||| Sbjct 404255 CAGTCGG-----CGTCTT----GTCCCACATGTCGTACTGCAGGATGCCCCTGCTGACGG 404205 Query 213154 GGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCC---AGCTCGCAGGACGCCT 213210 | ||| | ||| | ||||||||| | | ||||| ||||||||| |||| Sbjct 404204 GCGAGCCTTCGTACGTCTCGTAGGGGCCCAGTT---TGGCCGCGAGCTCGCAGCTGGCCT 404148 Query 213211 GCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGG 213270 ||| || |||||||||||||| ||||| |||| |||||||| || ||||| || Sbjct 404147 CCAGAGCGGCGTAGTAGATGGTCTCAAACATCTGGATGTTGAGCAGCTGAGCCTCCGG-- 404090 Query 213271 ACGTG--AAGGG------CATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCC 213322 || | ||||| ||||| ||| || | || || | |||||||| || Sbjct 404089 ACTTTCAAAGGGGTAACGCATCAAGATG------AAGGCGTCTGCTAAACCCTGGACTCC 404036 Query 213323 GATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTT 213382 ||| ||||| || ||||| | ||| ||| | | ||| | ||||| |||| Sbjct 404035 GATTCCGATCGGCCTGTGGCGTTTGTTGGACATCTCGGCCTCGGGGACCGGGTAGTAGTT 403976 Query 213383 GCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTC 213442 | || ||||||||||| | ||| | ||||||||| ||| ||||| | | Sbjct 403975 GATTTCAATGATCTTGTTCAAGTTTTTGACTATCACTTTGGTCACAGATGCCAGTTTTT- 403917 Query 213443 GTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTT 213502 | | | | || | | | | || || || || |||||| ||||| || Sbjct 403916 -TAAAGTCATAAGTGCGCTCAGGCGTG-ACGTACATGTTGAGAGCGATGGATGCCAGATT 403859 Query 213503 GCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCA 213562 |||||| |||||||| | | | ||||| |||| || ||| ||||||| ||||||||| Sbjct 403858 GCAAACTGCCACCTCGTCGGCGCTGGTGTATTCCACGACCTCCGTGCACAAGTTGCTGCA 403799 Query 213563 TCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCAT 213622 |||||||||||| ||||| ||||| ||| |||| | || ||||| | ||| Sbjct 403798 CTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCACGCGTCTTTGTACAACAT 403739 Query 213623 GTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTT 213682 ||| || | |||||||| ||||||| | | || | ||| || | | || || Sbjct 403738 GTACGGCGTTCCGGTCTCCGTCTGGGACTCTATGATGGCGTACCAAAGCTGCTGAGCTTT 403679 Query 213683 GACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGT-TCGTAGAGCTCGTTGAATT 213741 ||||| ||| | || |||| | | |||||| ||| ||| |||| | || | Sbjct 403678 CACCACACGCTTCAC-CCTCCCTTCCT--TCTCGTA-TGTAGTGTACAGCTTCTCAAACT 403623 Query 213742 CGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCC 213801 | | |||||| | ||| || |||||||| ||||||||| || ||||||| Sbjct 403622 CCTCCCCCCAGCACTCGTCGAGCCCCGGACACTCGTTGGGACACATCAGAGACCAGTCCT 403563 Query 213802 CG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCC 213860 | | |||| |||| || |||||||||||| |||| |||||| || ||| ||||| Sbjct 403562 GGTTGCTCTC-CACTCGCTTCATGAACAGGTCGGGGATCCACAGGGCATAGAAAAGGTCT 403504 Query 213861 CTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCC 213920 |||| ||| ||| ||| |||| ||| || ||| ||||| |||||||| | ||| Sbjct 403503 CTGGCTCTCTGCTCCTCCTTGCCAGTGTTCTTCTTCAGCTCTAGGAAGTCAAACACGTCA 403444 Query 213921 GCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCC---TCTTGCCGCCCTGGTCC 213977 ||||| ||||||| ||| ||||| ||||| || || | | ||||| || || || Sbjct 403443 AAATGCCAAGGCTCCAAGTACATGGCGAAGGCCCCGGGTCTTTTGTTGCCACCTTGATCG 403384 Query 213978 ACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCG 214037 || | || ||||| | | | ||| | ||| |||||||||||||| | ||| Sbjct 403383 ACGTAGCGAGCGGTGTTGTTGTAAACTCTCAGCATGGGAACCAGCCCGTTGGAGTTCCCG 403324 Query 214038 TTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCA 214097 ||||| || || || || || | || || | | ||| | | | || ||||| Sbjct 403323 TTGGTACCGGCGATGTAGCTCCCAGTGGATCTGATGCAGCTGACCGCTACGCCAATGCCT 403264 Query 214098 CCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTG 214157 ||||| ||||||| || | |||||| || ||| || || |||||| | |||||| Sbjct 403263 CCGGCAGACTTGGAAATGAGGGCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTG 403204 Query 214158 TCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTG 214217 || ||| | | | |||||||||||||| || ||||| |||| | || | |||| Sbjct 403203 TCGTCTTTCATGGCGAGCAAGAAGCAGCTGGACAGCTGCGGCCGATTGGTTCCTGCGTTG 403144 Query 214218 AAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGG 214277 || || || || ||| || | | |||| | || || || |||| ||||| | | Sbjct 403143 AAGAGAGTCGGAGAGGCGTGAGTGAACCACTTCTCTGACAGCAGATTGTACGTCTCGATG 403084 Query 214278 ACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGC 214337 | | ||||||| | ||||||| | || |||||| ||||||||||| || Sbjct 403083 GCCGCTTCGATGTCGGTCCCGTGGATCCCAACAGACACCCTCATGAGCATGTGCTGCGGG 403024 Query 214338 CTCTCTATGGGTCCTTTGGGGCCCTTG------AGCAGGTAGGAGCGCTCCAGAGTCTTG 214391 | ||| | |||| ||| ||| ||||| ||||||||||||||||||||| Sbjct 403023 CGCTC--GGCCACCTT----GCCGTTGATTTTCAGCAGATAGGAGCGCTCCAGAGTCTTG 402970 Query 214392 AACCCAAAGTAGGAGTAGG 214410 || || ||| || ||||| Sbjct 402969 AATCCGAAGAAGTTGTAGG 402951 >seq54 Length=2580060 Score = 219 bits (242), Expect = 8e-52 Identities = 192/239 (80%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448 |||||||||| || || |||| ||| |||| ||||||||| || |||||||| || | Sbjct 1955493 GCTGACAGCCGCTGCTCACGTGCGTCAGCACCTTCTGTTTGAGCTGCGCCACCTGATCTC 1955434 Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508 |||| || ||||| || ||||| || || |||||||| ||| ||||||||||| |||| Sbjct 1955433 GCAGCACCGACGCCGTGTTGGAGAGCCCCGCGTTGTCGTTCTTCAGCACCTTCACCTTCT 1955374 Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568 ||||||||||||||||||| ||||| |||||| ||||| |||||||| |||| |||| Sbjct 1955373 CCTCCAGCCGCGCGATGCGCTCCAGCTTGCGCTTCCGGCACTTGGTGGCCGCCAGCCGGT 1955314 Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||| || | ||| || ||||||||||| || ||||| ||||| |||||| |||||| Sbjct 1955313 TCCTCAGCCGCTTGCGCTCCGCCTTGATCCGCTCCTGAGACTCCAGGTCGATGGGAGAC 1955255 Score = 98.7 bits (108), Expect = 2e-15 Identities = 90/115 (78%), Gaps = 8/115 (7%) Strand=Plus/Minus Query 238926 TCTGTTTGAGTTGGGCCACCCGGTCCCGCAGAACGGACGCGGTATTGGACAGACCCGCGT 238985 |||||||||| || |||||| | || ||||| || ||||| || ||||| || ||||||| Sbjct 1955460 TCTGTTTGAGCTGCGCCACCTGATCTCGCAGCACCGACGCCGTGTTGGAGAGCCCCGCGT 1955401 Query 238986 TATCAGACTTGAGCA--------TTCTCCTCCAGCCGCGCGATGCGTTCCAGCTT 239032 | || ||| |||| ||||||||||||||||||||||| |||||||| Sbjct 1955400 TGTCGTTCTTCAGCACCTTCACCTTCTCCTCCAGCCGCGCGATGCGCTCCAGCTT 1955346 >seq301 Length=692279 Score = 210 bits (232), Expect = 4e-49 Identities = 193/244 (79%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448 |||| ||||| || || |||| || ||| | ||||||||| || |||||||| |||| Sbjct 606666 GCTGGCAGCCACTGCTCACGTGCGTCATGACTTTCTGTTTGAGCTGTGCCACCTGTTCCC 606607 Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508 |||| | || || || || ||||| || |||||||| | || || |||||||| || | Sbjct 606606 GCAGCAGGGTGGCCGTGTTCGACAGCCCGGCGTTGTCGGTTTTCAGAACCTTCACCTTGT 606547 Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568 ||||||| ||||||||||| ||||| ||||||| || || |||| ||| |||| |||| Sbjct 606546 CCTCCAGACGCGCGATGCGCTCCAGCTTGCGCCTCCGACACTTGGAGGCCGCCAGCCGGT 606487 Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGACT 241628 |||| || | ||| || |||||||||||||| ||||||| ||||| ||||||||| ||| Sbjct 606486 TCCGCAGCCGCTTGCGCTCCGCCTTGATGCGCTCCTGGTTCTCCAGGTCGATCGGGGACA 606427 Query 241629 TGGG 241632 |||| Sbjct 606426 TGGG 606423 >seq1174 Length=128547 Score = 147 bits (162), Expect = 4e-30 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 241414 CAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAG 241473 |||||||| ||| || || ||||||||||| |||||||| ||| || || | ||| Sbjct 26688 CAGGACCTTCTGCTTCAGCTGGGCCACCTGCTCCCGCAGCACGTTGGCCGTGGACGCCAG 26747 Query 241474 TCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAG 241533 | | ||| | |||||||| |||||| |||||||||||||| | |||||| ||||| Sbjct 26748 CTCCGAGTTCTGGGACTTGAGGGTCTTCACCTTCTCCTCCAGCCGGGAGATGCGCTCCAG 26807 Query 241534 TTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTT 241593 || | | ||||| |||| ||| || | |||||||| | | ||| | |||||||| Sbjct 26808 CTTCCTCTTTCGGCACTTGGAGGCGGCGATGCGGTTCCTCATGCGCTTCCTCTCCGCCTT 26867 Query 241594 GATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 |||||| |||||| |||||||||||| || ||| Sbjct 26868 GATGCGCTCCTGGCTCTCCATGTCGATGGGGGAC 26901 >seq1399 Length=84960 Score = 138 bits (152), Expect = 2e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 241418 ACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCT 241477 |||| ||||||||| ||||||||||| |||||||| | || ||||| || ||| | Sbjct 18064 ACCTTCTGTTTGAGCTGGGCCACCTGCTCCCGCAGCATGGCGGCGGTGGAGGCCAGGTCC 18005 Query 241478 GCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTG 241537 | ||| | ||| || ||||| || ||||||||||| || | |||||| ||||| || Sbjct 18004 GAGTTCTGGCTCTTCAGGACCTTGACCTTCTCCTCCAGGCGGGAGATGCGCTCCAGCTTC 17945 Query 241538 CGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATG 241597 | | |||||| |||| || || | |||||| || || |||| ||||| |||||||| Sbjct 17944 CTCTTGCGGCACTTGGACGCGGCGATGCGGTTGCGCAGCTTCTTGCGTTCGGCCTTGATC 17885 Query 241598 CGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 || ||||| ||||| ||| ||||| || Sbjct 17884 CGCTCCTGCGTCTCCAGGTCAATCGGGGA 17856 >seq38 Length=2821725 Score = 113 bits (124), Expect = 8e-20 Identities = 126/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 213527 TGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTG 213586 ||||||||| | |||||| ||||||||||||||| || ||||||||||||||| || || Sbjct 1026611 TGTGTACTCTACGATCTCCGTGCACAGGTTGCTGGATTTGATGGTGCCCAGGTTTTGCTG 1026552 Query 213587 GTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646 ||| ||| |||| | ||||||||||||||||| || | ||| || ||| ||| Sbjct 1026551 GTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTAAGGCGTCCCRGTTTCTGTCTG 1026492 Query 213647 GGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTG 213695 ||| | | || | ||| || | | ||||| |||||||||||| Sbjct 1026491 CGACTCGATGATGGCGTACCACAGCTGCTGAGCCTTCACCACCCGCCTG 1026443 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 |||||| || |||||||||||||| | ||| | ||| ||||| | |||||| Sbjct 1027532 CTGGAACTCTCCTGAGAGCACCCTGCGAGTGTAGATGTTGCTCGTGTACGCCTCGATCGA 1027473 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||||||||| ||||| ||||| || ||| ||| |||||||| || |||| ||| || || Sbjct 1027472 CTCGTTGTTGCCCAGGATCTGAGCCGTGGAGGCCGTGGGCATCGGGGCCAACAGCAGGCT 1027413 Query 213038 GTTCCTCACTCCGTGC 213053 ||||||||| |||||| Sbjct 1027412 GTTCCTCACACCGTGC 1027397 Score = 84.2 bits (92), Expect = 4e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872 ||||| | ||| || ||||| |||| ||||| ||| |||||| || |||| |||| Sbjct 1026147 ACTCTTTTCATAAAGAGGTCTGGGATCCACAAGGCGAAGAACAGATCTCTGGCCCTCTGT 1026088 Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932 || || || | ||| || ||| || ||||| ||||| | ||| | ||||||||| Sbjct 1026087 TCTTCTTTCCCGGTGTTCTTCTTCAGGTCCAGAAATTCAAACACGTCTGAATGCCACGGC 1026028 Query 213933 TCCATGTAGATGGCAAAGGCGCCCGGCCTCT 213963 |||| ||| || || || || || ||||||| Sbjct 1026027 TCCAGGTACATAGCGAACGCCCCGGGCCTCT 1025997 >seq74 Length=2059002 Score = 95.1 bits (104), Expect = 2e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 ||||| | ||| || || |||||||| || |||| ||| | | || || | ||| Sbjct 1828917 AGGACTTTCTGCTTCAGCTGGGCCACTTGCTCCCTCAGCAGGCTGGCCGTCGACGCCAGG 1828858 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | ||| ||| || || || |||||||||| | ||| || |||||| Sbjct 1828857 TCGGTGTTCTGGCTCTTCAGCGTTTTGACCTTGTCCTCCAGCCTGGAGATCCGCTCCAGT 1828798 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 ||||||| || || |||| |||||| | ||||||| || ||||| | || || ||| Sbjct 1828797 TTGCGCCTCCGACACTTGGAGGCTGCGATCCGGTTCCTCAGCCTCTTCCTCTCGGCTTTG 1828738 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGA 241619 ||||| ||||| |||||||||| Sbjct 1828737 ATGCGCTCCTGCGTGTCCATGTCGA 1828713 >seq2653 Length=13515 Score = 93.3 bits (102), Expect = 8e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| ||||| || || |||||||||||||| ||||| ||||||| ||||||||||| Sbjct 12324 CTGGTACTCCCCGACCCTCTTCTCAAAGAAGTTGGTCTTTCCCTCCAGAGAGATGTTCTC 12265 Query 47899 CATGAAGAGGAAGGGGTTG 47917 ||||||| ||||||||| Sbjct 12264 CATGAAGTCAAAGGGGTTG 12246 Score = 89.7 bits (98), Expect = 1e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||| | |||||||||| ||||| |||| ||||| ||||| | || | || || Sbjct 11616 TCGTCTCTGCTGATGAGCTCGTTGCTGAAGGTCAGACCGGGCATCAGGCCTCGCTTCTTC 11557 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 | |||||| || | ||||| || || ||||||||||| |||||||| || |||||||| Sbjct 11556 AACCAGAAGATGGAGGCGAACGAACCGGAGAAGAAGATCCCCTCCACAGCAGCGAACGC 11498 >seq558 Length=349536 Score = 91.5 bits (100), Expect = 3e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| ||||| || | |||||||||||||| ||||| ||||||| ||||||||||| Sbjct 123204 CTGGTACTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTTCCCTCCAGAGAGATGTTCTC 123263 Query 47899 CATGAAGAGGAAGGGGTT 47916 ||||||| ||||||||| Sbjct 123264 CATGAAGTCGAAGGGGTT 123281 Score = 89.7 bits (98), Expect = 1e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||| | |||||||||| ||||| |||| ||||| ||||| | || | || || Sbjct 123756 TCGTCTCTGCTGATGAGCTCGTTGCTGAAGGTCAGACCGGGCATCAGGCCTCGCTTCTTC 123815 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 | |||||| || | ||||| || || ||||||||||| |||||||| || |||||||| Sbjct 123816 AACCAGAAGATGGAGGCGAACGAACCGGAGAAGAAGATCCCCTCCACAGCAGCGAACGC 123874 Score = 84.2 bits (92), Expect = 4e-11 Identities = 76/93 (82%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||||||||||||| | ||||| || ||||||||||| |||||||| ||||||||| Sbjct 126785 GTACATCTCAGAGTGGATGTTCTCCATGGCGATCTGGAAGCCGTAGAAACACCTGGCCTC 126844 Query 48484 AAACACCTGCACTT-CTGTGGAGAATCTCTCCA 48515 | |||||| |||| |||| | ||| | ||||| Sbjct 126845 AGTCACCTGGACTTCCTGT-GTGAAGCGCTCCA 126876 >seq33 Length=3077319 Score = 84.2 bits (92), Expect = 4e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || |||| |||||| || | |||||| || || |||||||||| || |||| || Sbjct 3039102 TCATCCCTGCTGATCAGTTCATTGGAGTAGGTCAGGCCAGGCATGAGGCCTCTCTTCTTT 3039043 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 ||||| | || || || || ||||| |||||||||||||||||||| || || || || Sbjct 3039042 AGCCAATAGATGGCAGCAAAGGAGCCTGAGAAGAAGATGCCCTCCACGGCTGCAAAAGC 3038984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931185978694400