Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Austrofundulus_20limnaeus_20[refseq_20GCF_5F001266775.1_202015-07- 28] 29,785 sequences; 866,963,281 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq345 86.0 2e-11 >seq345 Length=614307 Score = 86.0 bits (94), Expect = 2e-11 Identities = 120/167 (72%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG---TATTCTACA 155639 ||| | || || |||||||| || || || | ||| |||| ||||| ||||| || Sbjct 403878 AGAGCGATGGATGCCAGATTGCAAACTGC---CACCTCGTCGGCGCTGGTGTATTCCACG 403822 Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 | ||| ||||| ||| | |||||||||||| | ||||| |||||| || ||| Sbjct 403821 ACCTCCGTGCACAAGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTG 403762 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTG 155746 || || || || ||||| | ||||| || ||||| |||||| |||| Sbjct 403761 TTGCACGCGTCTTTGTACAACATGTACGGCGTTCCGGTCTCCGTCTG 403715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471255924507545