Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Austrofundulus_20limnaeus_20[refseq_20GCF_5F001266775.1_202015-07- 28] 29,785 sequences; 866,963,281 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq319 132 4e-26 >seq319 Length=759719 Score = 132 bits (146), Expect = 4e-26 Identities = 132/172 (77%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || ||||| || ||||||||||| || | ||||| |||||| || | |||||| ||||| Sbjct 409678 AGGTCAGTTTCAGGGTTGTCACACTCGGCACACAGCACAAATTTTCTGATGAACCCATCC 409619 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| |||||| | ||| | |||||||| || ||||||||| | || ||||||||| Sbjct 409618 AGCATGTCCTGCAGCTTGTTCGCCTCGTGGGATCCRTTGACGATGTAACGATCGTTTTTG 409559 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 ||| | ||| || || ||||| || || || ||||| |||| ||||||| Sbjct 409558 GTATCAAACTGGGTCTGAGCGCCGAGTTCACAACCGAAAAACTTAGTCGGGT 409507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412691736564005