Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Austrofundulus_20limnaeus_20[refseq_20GCF_5F001266775.1_202015-07- 28] 29,785 sequences; 866,963,281 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq101 143 3e-29 >seq101 Length=1578606 Score = 143 bits (158), Expect = 3e-29 Identities = 129/162 (80%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 146997 GTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCC 147056 ||| || | |||||||||||| || | ||||||||| |||||||| || |||||||| || Sbjct 214036 GTGTGCGATCATGTAGGTGAGAAGAGCGTAGCTGGCGATGTTGAAAGGCACCCCCAGACC 214095 Query 147057 CATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTG 147116 |||||| |||| | |||||||||||| || || ||||| ||||| ||||| ||||| Sbjct 214096 CATGTCGGCCGAGCGCTGGTACAGCTGACAGGACAGCTCGCCGTCACAGACGTAGAACTG 214155 Query 147117 GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTC 147158 ||||| |||||| || ||||| |||||| ||| ||||| Sbjct 214156 ACACAGAGCGTGGCAGGGGGGCAGAGCCATGAGGGGGAGGTC 214197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583270760124000