Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Austrofundulus_20limnaeus_20[refseq_20GCF_5F001266775.1_202015-07- 28] 29,785 sequences; 866,963,281 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq101 86.0 5e-12 >seq101 Length=1578606 Score = 86.0 bits (94), Expect = 5e-12 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || |||| | ||| || |||||||| || | | | ||||||||| | || ||||| Sbjct 214025 AGTCCTGCGATGTGTGCGATCATGTAGGTGAGAAGAGCGTAGCTGGCGATGTTGAAAGGC 214084 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 || |||||||||||||| || || | |||||||| || || || ||||| |||| Sbjct 214085 ACCCCCAGACCCATGTCGGCCGAGCGCTGGTACAGCTGACAGGACAGCTCGCCGTCACAG 214144 Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATG 118695 || || ||||||| | ||| || || |||||| ||||| Sbjct 214145 ACGTAGAACTGACACAGAGCGTGGCAGGGGGGCAGAGCCATG 214186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414326342978740