Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq9943 114 1e-20
>seq9943
Length=499256
Score = 114 bits (126), Expect = 1e-20
Identities = 98/121 (81%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045
|||||||||||||||| |||||||| || || |||| ||||||||| ||||||||||
Sbjct 292078 CCTCGTCTCTGCTGATGAGTTCGTTGGAGAAGGTCAGTCCGGGCATCAGGCCTCGTTTCT 292019
Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105
| | ||| || || |||||||| || ||||| ||||| || |||||||| | || ||||
Sbjct 292018 TGAGCCAGAAAATGGCGGCGAAGGATCCAGAGAAGAAGATCCCCTCGACAGCGGCGAACG 291959
Query 17106 C 17106
|
Sbjct 291958 C 291958
Score = 86.0 bits (94), Expect = 6e-12
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 17219 TCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTC 17278
|||||| ||| | || || || |||||||| || |||||||| || ||||| ||||||
Sbjct 291153 TCCTGTGAGTCTTTGATGTAGGTGTCGATGAGCAGACTGTACATCTCTGAGTGGATGTTC 291094
Query 17279 TCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCG 17318
|||||||| ||||| || || || || |||| ||| ||||
Sbjct 291093 TCCATGGCGATCTGGAACCCATAGAAACATCTGGCCTCCG 291054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517438079901600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |