Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq12570 86.0 5e-12 >seq12570 Length=3236859 Score = 86.0 bits (94), Expect = 5e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| || |||||||| ||| | | |||||||| || || | || || | ||| Sbjct 1218973 ATGGCTCTGCCTCCATGCCACGCTCTTTGTCAGTTCTATGTGTGTGATGGCGAGCTGTCC 1218914 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 ||||| | || ||| | || || || ||||| || || ||||| ||||| ||||| | Sbjct 1218913 TGCCAGCTTTATCAGCGCTCTGGTGACATGGGTCTGGGAGTACCTTTCAATATTGCCAGC 1218854 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAA 19136 ||||||||||| || ||||| | || || | |||||||| ||| Sbjct 1218853 TATGCACTTCTAACATACATGATCGCCCACATCACAGGACTAAAA 1218809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399423077967900