Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq12570 129 7e-25
>seq12570
Length=3236859
Score = 129 bits (142), Expect = 7e-25
Identities = 125/161 (78%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
|| || |||| |||||||| |||||| || || || | |||||||| || ||||| ||
Sbjct 1218813 AGTCCTGTGATGTGGGCGATCATGTATGTTAGAAGTGCATAGCTGGCAATATTGAAAGGT 1218872
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869
|| ||||| |||||||| || |||||||| || ||||||||||| ||||| || | |
Sbjct 1218873 ACTCCCAGACCCATGTCACCAGAGCGCTGATAAAGCTGGCAGGACAGCTCGCCATCACAC 1218932
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910
|| |||||||| || || |||||| || ||||| |||||
Sbjct 1218933 ACATAGAACTGACAAAGAGCGTGGCATGGAGGCAGAGCCAT 1218973
Score = 84.2 bits (92), Expect = 3e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099
|||| | ||||| ||||| |||||||| || || || || ||||| ||||| || |||
Sbjct 1219283 GTACTCCGCCCCAAAGTGTCTCCACTGAAAGCCATAAACCGGCCCAAGGTCTCCCTCCTC 1219342
Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159
| || | ||| || | | |||||||| || || || ||||||||||| |||||
Sbjct 1219343 TCGGTCAGTAAACCCACCCTTGTCCAGGAAGTCACGAGAACCATTGGCGTCCCAAATCTT 1219402
Query 146160 GACGCCCCTCGCGGAGAGCTCATTGG 146185
|| || | || |||||||| ||||
Sbjct 1219403 CACCCCTTTTGCAGAGAGCTCTTTGG 1219428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589954211544800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |