Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq12570 129 7e-25 >seq12570 Length=3236859 Score = 129 bits (142), Expect = 7e-25 Identities = 125/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || || |||| |||||||| |||||| || || || | |||||||| || ||||| || Sbjct 1218813 AGTCCTGTGATGTGGGCGATCATGTATGTTAGAAGTGCATAGCTGGCAATATTGAAAGGT 1218872 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| |||||||| || |||||||| || ||||||||||| ||||| || | | Sbjct 1218873 ACTCCCAGACCCATGTCACCAGAGCGCTGATAAAGCTGGCAGGACAGCTCGCCATCACAC 1218932 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || |||||||| || || |||||| || ||||| ||||| Sbjct 1218933 ACATAGAACTGACAAAGAGCGTGGCATGGAGGCAGAGCCAT 1218973 Score = 84.2 bits (92), Expect = 3e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| | ||||| ||||| |||||||| || || || || ||||| ||||| || ||| Sbjct 1219283 GTACTCCGCCCCAAAGTGTCTCCACTGAAAGCCATAAACCGGCCCAAGGTCTCCCTCCTC 1219342 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 | || | ||| || | | |||||||| || || || ||||||||||| ||||| Sbjct 1219343 TCGGTCAGTAAACCCACCCTTGTCCAGGAAGTCACGAGAACCATTGGCGTCCCAAATCTT 1219402 Query 146160 GACGCCCCTCGCGGAGAGCTCATTGG 146185 || || | || |||||||| |||| Sbjct 1219403 CACCCCTTTTGCAGAGAGCTCTTTGG 1219428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589954211544800