Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq11935 91.5 2e-13 >seq11935 Length=3744941 Score = 91.5 bits (100), Expect = 2e-13 Identities = 175/256 (68%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 83140 CAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAG 83199 || ||| ||||||||||||||||| | ||| || | |||||| || |||| ||| Sbjct 1784599 CAGGAATTTCTCGAAGTTCCAGGCGATGTCATTCCTGCACACAGGGCTCCAGATGATGCT 1784658 Query 83200 CTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAG 83259 | |||||| ||| ||| | | ||||| || |||| || || |||| || Sbjct 1784659 TTTGGGGTCATTCATGAGGGAGGAGGGTTCGTCACTGGGCGTAGGTAGTTTCTCTTTCAG 1784718 Query 83260 GAAGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATA 83317 | |||| | || || || | |||| |||| || || ||||||| || ||| Sbjct 1784719 ATAAACGAACAAAGGGTGCGCATCTTTGC--CGTTCACTTCTAACTTCTCCAAAAGCCGG 1784776 Query 83318 AAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCA 83377 || ||||||||||| || |||||||||||||||| |||| ||| || ||| || || Sbjct 1784777 AACTTCGGCTCGAAACCATTCCCAGGACGGACGTATTTCAAGGACAACAGGATTTCTTCA 1784836 Query 83378 TTCTGGGCGTTTTCCT 83393 || | | ||| |||| Sbjct 1784837 TTTTTGCAGTTCTCCT 1784852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608670322464800