Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq10290 109 5e-19
>seq10290
Length=4455921
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|| ||||| | || || ||||| || |||||||| ||| | || ||| ||||||
Sbjct 2173064 ACTAAGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCATCCTCA 2173005
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || ||||| | || || | || ||||| || || ||||| |||||||| |
Sbjct 2173004 AGCTGCTTGCCAGCAAAAATAAGCCTTTGTTGATCTGGGGGAATGCCTTCCTTGTCCTGA 2172945
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||| || | ||| | |||||| || ||| ||||| | ||| | ||||||
Sbjct 2172944 ATCTTAGCTTTCACGTTTTCAATGGTGTCACTGGGCTCAACCTCAAGGGTAATAGTTTTG 2172885
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||||| || || || ||||| || ||||||
Sbjct 2172884 CCGGTGAGGGTCTTGACAAAGATTTGCATG 2172855
Score = 96.9 bits (106), Expect = 3e-15
Identities = 147/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| || || ||||| ||||||||||| || || |||||| || ||||
Sbjct 2171144 CAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCGTCTTCGA 2171085
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
|||| || || || | || || | ||||||||| || || ||||| |||||||| ||
Sbjct 2171084 GCTGCTTGCCGGCAAAAATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAA 2171025
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || || || | || | |||||| || ||| ||||| | || | || || |
Sbjct 2171024 TCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAAAGTGATGGTCTTCC 2170965
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || || ||||| ||||| ||||||||
Sbjct 2170964 CAGTGAGGGTTTTCACAAAGATCTGCAT 2170937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433742524941040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |