Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq10290 122 6e-23
>seq10290
Length=4455921
Score = 122 bits (134), Expect = 6e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||||||||| ||||||||||| ||||| ||| |||| || | ||||||||| || ||
Sbjct 2171128 TTCTTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAA 2171069
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
||| |||| |||||| || ||| | || |||||||| ||||| ||| | ||
Sbjct 2171068 AATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATT 2171009
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| || | ||| | | || || |||| |||||||| || || ||||| ||||||||
Sbjct 2171008 CTCAATGGTGTCGCTGGGCTCCACCTCCAAAGTGATGGTCTTCCCAGTGAGGGTTTTCAC 2170949
Query 34378 AAAGATCTGCAT 34389
||||||||||||
Sbjct 2170948 AAAGATCTGCAT 2170937
Score = 113 bits (124), Expect = 3e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||||||||| ||||||||||| || || ||| | || || | ||||||||| || ||
Sbjct 2170900 TTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAA 2170841
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| | || |||||| || ||| | || |||||||| ||||| ||| | ||
Sbjct 2170840 GATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTAACATT 2170781
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| |||| ||| | | || || || | |||||||||||||| ||||| ||||||||
Sbjct 2170780 TTCAATCGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTCAC 2170721
Query 34378 AAAGATCTGCAT 34389
||||||||||||
Sbjct 2170720 AAAGATCTGCAT 2170709
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||||||||| ||||||||||| ||||| |||| |||| || | |||||| || || ||
Sbjct 2173275 TTCTTTCTGGATGTTGTAGTCAGACAGAGTACGGCCGTCTTCGAGCTGCTTTCCAGCAAA 2173216
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| | || |||||| || ||| | || |||||||| ||||| ||| | |
Sbjct 2173215 GATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 2173156
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| || | || | | || || |||| |||||||| || || ||||| ||||||||
Sbjct 2173155 CTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCAC 2173096
Query 34378 AAAGATCTGCAT 34389
||||||||||||
Sbjct 2173095 AAAGATCTGCAT 2173084
Score = 86.0 bits (94), Expect = 4e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
||| || | ||| | ||| ||||||||| |||||||||||||| || ||| | ||
Sbjct 2173068 CAGGACTAAGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCATC 2173009
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|| | ||||||||| || ||||| |||| || || || ||| | || ||||||||
Sbjct 2173008 CTCAAGCTGCTTGCCAGCAAAAATAAGCCTTTGTTGATCTGGGGGAATGCCTTCCTTGTC 2172949
Query 34297 GGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355
||| || ||||| | | | || | || | | || || || | || || |
Sbjct 2172948 CTGAATC-TTAGCTTTCACGTTTTCAATGGTGTCACTGGGCTCAACCTCAAGGGTAATAG 2172890
Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||||||||||| || || |||||||| |||||
Sbjct 2172889 TTTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 2172856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323006559747200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |