Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq12570 82.4 6e-11 >seq12570 Length=3236859 Score = 82.4 bits (90), Expect = 6e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATG 20452 |||| | |||||| |||||||||| || || || || || || || | || | Sbjct 1218981 TGCCACTTATGGCTCTGCCTCCATGCCACGCTCTTTGTCAGTTCTATGTGTGTGATGGCG 1218922 Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 | |||| || || | ||||| || || | ||| ||||| ||||| || |||||||||| Sbjct 1218921 AGCTGTCCTGCCAGCTTTATCAGCGCTCTGGTGACATGGGTCTGGGAGTACCTTTCAATA 1218862 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAA 20565 |||| || ||||| || || || || ||||| || || | |||| ||||| Sbjct 1218861 TTGCCAGCTATGCACTTCTAACATACATGATCGCCCACATCACAGGACTAAAA 1218809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399103142785900