Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq10290 111 1e-19
>seq10290
Length=4455921
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| || | |||||| || |||||||| || ||||||||||||| | || | |||
Sbjct 2173067 AGGACTAAGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCATCC 2173008
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | || ||||| ||| | ||||| ||||||||||| ||| | ||||||||| ||
Sbjct 2173007 TCAAGCTGCTTGCCAGCAAAAATAAGCCTTTGTTGATCTGGGGGAATGCCTTCCTTGTCC 2172948
Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292
||| | | || || || | | ||| ||||||| |||||| |||| ||| || |
Sbjct 2172947 TGAATCT-TAGCTTTCACGTTTTCAATGGTGTCACTGGGCTCAACCTCAAGGGTAATAGT 2172889
Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||||||| | || || ||||| ||||||||
Sbjct 2172888 TTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 2172856
Score = 87.8 bits (96), Expect = 1e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182
|| || || |||||||| || ||||||||||| | | || | ||| || | ||
Sbjct 2170911 TGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCAAGCTGC 2170852
Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242
||||| ||| |||| | || || ||||| ||| | ||||||||| || ||| |
Sbjct 2170851 TTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATCTTG 2170792
Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302
||| || | | ||| ||||| | |||||| |||| ||||||| ||||||| ||
Sbjct 2170791 GCCTTAACATTTTCAATCGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTTTTGCCAGTG 2170732
Query 18303 AATGTTTTTACAAAAATTTGCATTTT 18328
| ||||| ||||| || ||||| ||
Sbjct 2170731 AGGGTTTTCACAAAGATCTGCATATT 2170706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379267161501900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |