Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 358 6e-94
seq11714 129 5e-25
seq9943 84.2 2e-11
seq10290 82.4 7e-11
>seq9898
Length=4754808
Score = 358 bits (396), Expect = 6e-94
Identities = 996/1519 (66%), Gaps = 31/1519 (2%)
Strand=Plus/Minus
Query 22430 GTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGT 22489
|||| || |||| |||||| |||| || | |||||||| ||||| | ||| | ||||
Sbjct 101336 GTCAGGTCCTTGAGCAGATGTGGGTTTACAATCTGAAACTCTCCGGAGAGGACTCTGCGT 101277
Query 22490 TGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTC 22549
||| |||||| ||| | | ||||| || |||||||| || ||||| || || ||
Sbjct 101276 GTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCTAGTATTTGTGCTGTG 101217
Query 22550 GAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTA 22609
||||| || ||||| || ||||||| || ||| |||| || || || | ||| ||
Sbjct 101216 GAAGCAGTAGGCATGGGGGCCAACAACAGGCTGTTCCTCACACCATGTTTAGTAATCTTC 101157
Query 22610 CTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTAT 22669
||| |||| | ||||||||| || | | |||| || || |||||||| ||||||
Sbjct 101156 TCCTTAAGCAGCTTCCAGTCCCAGAGCGCAGTCGGC---ACCTTCTCCCACATGTCGTAT 101100
Query 22670 TGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCG 22729
|||| | ||| |||| | || ||| ||| || || || || || | | | |
Sbjct 101099 TGCAGAATGCCCTTACTCACTGGAGAACCTGGGTATGTCTCATAAGGCCCGTCTTTTTCT 101040
Query 22730 GCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTC 22789
|| | |||||||| ||||||| ||| |||| ||||| ||||| ||||| | |||||
Sbjct 101039 GCTAACTCGCAGCTTGCCTCCAGGGCGGCGTAGTATATTGTCTCAAAGATCTGGATGTTC 100980
Query 22790 AATTCGGC--GGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCA 22847
| | || ||| | ||||| | || |||||| | | ||| || || || |
Sbjct 100979 AG--CAGCTGGGCTTCAGGACTTTCAAATGGATAACGCATGAGAATGAAGGCATCTGCGA 100922
Query 22848 TACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCA 22907
|||||| || || || ||||| || | || | ||||| | || || || |
Sbjct 100921 GACCCTGCACTCCAATTCCGATTGGCCTGTGGCGCTTGTTCGAGTTCTCGGCTTCAGGGA 100862
Query 22908 AAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATT---TTCGTTA 22964
|| || | || || || | |||| | |||||| |||||| || || |
Sbjct 100861 CTGGGTAGTAGTTAATGTCAATGATCTTGTTGAGGTTTCTT---ACAATTACTTTAGTGA 100805
Query 22965 TNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGAT-TGTAC-AACAAACTTGTTGACGGC 23022
| ||||| ||| | ||| | || | |||| || |||| | ||
Sbjct 100804 CAGAGGCAAGCTTTTTGAAGTC--AAAGGTCCGTTCTGGAGTAACATACATGTTAAGAGC 100747
Query 23023 GATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGT 23082
|| || || | || || ||||| ||||| |||||| || ||||| ||||| || ||
Sbjct 100746 AATAGAAGCCAAGTTACAGACGGCTACCTCATCTTTGCTTGTATACTCCACAATCTCAGT 100687
Query 23083 ACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGA 23142
|| | || || || || || ||||||||||| ||| || || || | || || |
Sbjct 100686 GCACAAGTTACTGCATTTGATAGTGCCCAAATTCTGCTGATTACTCTTCCTGTTACAGGC 100627
Query 23143 ATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCA 23202
||| ||||| | |||||| || || || || || ||| ||||| ||||| || |||
Sbjct 100626 ATCTTTGTACAACATGTAAGGAGTTCCTGTTTCAGTCTGAGACTCTATGATGGCATACCA 100567
Query 23203 CATAGTCTGAGCGT-GAACAC--GTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTA 23259
|| |||||| | || ||| || ||| |||||||| | |||||| |||
Sbjct 100566 CACCTGCTGAGCCTTGACCACCCGTTTCACT---CTGCCTTCCTGCTCGTAGCGAGTGTA 100510
Query 23260 CAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACAT 23319
|| | ||||| || | || |||| || |||| || || | | | || |||||
Sbjct 100509 CAGCTTCTCAAACTCCTCCCCCCAACACTCATCCAGCCCAGGGCACTCACTGGGGCACAT 100450
Query 23320 GAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGC 23379
| | ||| || ||||| || | |||| || | ||| || |||||||| ||
Sbjct 100449 CAAAGACCAGTCCTGGTTGTTTTCCACCCTCTTCATGAACAAATCAGGGATCCATAGGGC 100390
Query 23380 GTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAA 23439
||||| || || || || | | ||||||||| || |||||||| || || || | ||
Sbjct 100389 ATAGAAGAGGTCTCGTGCCCTCTGCTCCTCTTTACCAGTGTTCTTCTTTAACTCAAGGAA 100330
Query 23440 GTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATT 23499
||| |||||||| ||||| ||||| ||||| | |||||| || || |||| |||||
Sbjct 100329 GTCAAACACGTCAAAGTGCCATGGCTCAAGGTACATGGCAAAGGCACCAGGTCGTTTATT 100270
Query 23500 GCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACC 23559
||| || || || ||||| || ||||||||||||||||| || ||||| ||||| || ||
Sbjct 100269 GCCACCTTGGTCCACGTAGCGCGCCGTGTTGTTGTACACCCTCAGCATTGGCACAAGGCC 100210
Query 23560 GTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTG 23619
|| || || | || || | ||| ||| || || | | |||
Sbjct 100209 ATTTGAATTACCATTTGTTCCAGCAATGTAGCTTCCTGTTGATCTAATGCAGCTAACTGC 100150
Query 23620 GAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGAT 23679
| ||| || ||||| | ||||| || || | ||||||||||| || || || || ||
Sbjct 100149 TACACCAATCCCTCCTGCAGATTTGGAGATGAGAGCGCATTGTTTGAGTGTATCATAAAT 100090
Query 23680 GCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGG 23739
||| || |||||||| || || | || | || ||| || ||| | || | | ||
Sbjct 100089 GCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAACTAGAGAGCTGTGGTCTGTT 100030
Query 23740 CGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCA-TTC---GACATTA 23795
|| | || |||||| || || ||| || || || ||| ||| |||| |
Sbjct 100029 GGTGCCTGCATTGAACAGAGTGGGAGAGGCATGAGTGAA----CCACTTCTCAGACAGCA 99974
Query 23796 GATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCA 23855
| ||||| || || ||||| |||||||| || | ||| || || | || || | ||
Sbjct 99973 GGTTGTAGGTCTCAATGGCTGCATCAATATCAGTTTTGTGGATTCCAACAGCTACTCTCA 99914
Query 23856 TCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTT 23915
| | ||||| || || | ||| || ||| || ||||| | ||| || || || |
Sbjct 99913 TGAGCATGTGCTGTGGACGCTCAGCCACCTTGCCATTGATTTTCAGCAGGTAGGAGCGCT 99854
Query 23916 GCATCGTTTTAAATCCAAA 23934
| || ||||| |||||
Sbjct 99853 CTAGGGTCTTAAAGCCAAA 99835
>seq11714
Length=3826745
Score = 129 bits (142), Expect = 5e-25
Identities = 122/156 (78%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399
|||| || || ||||||||||||| || ||||| ||||| ||||||| || ||||| |
Sbjct 1502470 TTTCCACACGCTTCATAAAAAGATCTGGGATCCACAGAGCAAAGAACAGATCTCGGGCTC 1502529
Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459
| ||||||||| || ||||| || || ||||| | ||| || ||||| || |||||
Sbjct 1502530 TCTGCTCCTCTTTACCAGTGTTTTTCTTTAAATCAAGAAAATCAAACACATCAAAATGCC 1502589
Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCT 23495
| ||||||||||| || ||||| || || |||||||
Sbjct 1502590 ATGGCTCGAGGTAGACTGCAAATGCCCCAGGTCTCT 1502625
Score = 102 bits (112), Expect = 7e-17
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
|||||||||||| ||||| |||||||| || || || || || || | || || |||
Sbjct 1502019 ACCTCGTCTTTGCTTGTGTATTCTACAATCTCAGTGCACAGGTTACTGGATTTGATGGTG 1502078
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
|| ||||| |||||| || || | ||| || | ||| ||||||||||||||||| ||
Sbjct 1502079 CCTAAATTCTGCTGGTTACTCTTCCTATTACATGCATCTTTGTAGAGCATGTACGGTGTC 1502138
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196
|| ||||| ||| ||||| || || ||
Sbjct 1502139 CCTGTCTCTGTCTGTGACTCAATAATGGC 1502167
>seq9943
Length=499256
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
||||||||||| ||||| || || ||||| || || ||| || || || || ||| |
Sbjct 291958 GCGTTCGCCGCTGTCGAGGGGATCTTCTTCTCTGGATCCTTCGCCGCCATTTTCTGGCTC 292017
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081
|||||||| |||||||||||||| ||||| || ||||||
Sbjct 292018 AAGAAACGAGGCCTGATGCCCGGACTGACCTTCTCCAACGA 292058
>seq10290
Length=4455921
Score = 82.4 bits (90), Expect = 7e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||| || || ||||| || || |||||||| || ||| | || ||||| ||
Sbjct 2172855 CATGCAAATCTTTGTCAAGACCCTCACCGGCAAAACTATTACCCTTGAGGTTGAGCCCAG 2172914
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | |||| || ||| | || ||||||||||||| | || || || ||
Sbjct 2172915 TGACACCATTGAAAACGTGAAAGCTAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCA 2172974
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|| | || || || |||||||| ||| | || || || | ||| || ||
Sbjct 2172975 ACAAAGGCTTATTTTTGCTGGCAAGCAGCTTGAGGATGGGCGTACCCTCTCCGACTACAA 2173034
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||| || |||||||| |||||||| | || || | || || || ||||
Sbjct 2173035 CATCCAGAAAGAATCCACTCTTCACTTAGTCCTGCGCCTCAGAGGTGGTA 2173084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445673792030400
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