Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 96.9 7e-15
>seq9898
Length=4754808
Score = 96.9 bits (106), Expect = 7e-15
Identities = 173/253 (68%), Gaps = 0/253 (0%)
Strand=Plus/Minus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
||||| |||| |||||||||| || | || || ||||||||||| || ||||||
Sbjct 100139 CCTCCTGCAGATTTGGAGATGAGAGCGCATTGTTTGAGTGTATCATAAATGCCATCAATG 100080
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911
|| ||||| | | | |||| |||||||| || || || ||| || || || |
Sbjct 100079 CTGTCATCCTTCATGGCCAGCAGGAAGCAACTAGAGAGCTGTGGTCTGTTGGTGCCTGCA 100020
Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971
|| ||||| ||||| || ||||| || || | | | |||| || | || || |||
Sbjct 100019 TTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAGGTTGTAGGTCTCA 99960
Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031
||| | | | || || | | ||| || || ||||| || | ||| | ||||| |||
Sbjct 99959 ATGGCTGCATCAATATCAGTTTTGTGGATTCCAACAGCTACTCTCATGAGCATGTGCTGT 99900
Query 95032 GGGCGCTCAACCA 95044
|| |||||| |||
Sbjct 99899 GGACGCTCAGCCA 99887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989373274272100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |