Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq12570 111 1e-19 >seq12570 Length=3236859 Score = 111 bits (122), Expect = 1e-19 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 || || |||| ||| ||||||| || || || || || |||||||| || || || || Sbjct 1218813 AGTCCTGTGATGTGGGCGATCATGTATGTTAGAAGTGCATAGCTGGCAATATTGAAAGGT 1218872 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || || || |||||||| | || | ||| || ||||||||||||||||| || | | Sbjct 1218873 ACTCCCAGACCCATGTCACCAGAGCGCTGATAAAGCTGGCAGGACAGCTCGCCATCACAC 1218932 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCAT 21151 || || |||||||| | | |||| || ||||| |||||||| Sbjct 1218933 ACATAGAACTGACAAAGAGCGTGGCATGGAGGCAGAGCCAT 1218973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427689351297600