Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq7879 163 2e-35 >seq7879 Length=1537716 Score = 163 bits (180), Expect = 2e-35 Identities = 193/260 (74%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 91799 CATTTCCCTGTCTTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA 91858 |||||||| ||||| ||||| ||||| |||| ||||||||| |||||| | | | Sbjct 573282 CATTTCCCAGTCTTCTCCTGTAAAGAAGACTGTGACATCATCACGGACACGGCCTCTAAG 573223 Query 91859 CTGGAACAAAGTGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTG 91918 ||||| | ||||| ||||||||||||||| |||| || || ||||| |||||| ||| Sbjct 573222 CTGGAGCGCAGTGGGTTCTACTGGGGTCCTCTGGGTGTGGAAGAGGCTCATCGT---CTG 573166 Query 91919 CGCAACTCGG---CACTGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTG 91975 | ||| || | |||||||| || || || || || ||| | || |||||||| || Sbjct 573165 CTCAAAGAGGCTCCTCTGGGCAGTTTCCTGATCCGAGACAGCCGTCAGAAGGACGTGTTC 573106 Query 91976 TTCACGCTGTCGTATCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAGGAC 92035 ||||| |||| || ||||| || ||| || |||||||| | ||||| | |||| | Sbjct 573105 TTCACTTTGTCCTACCACTCCAAGAGCGGCCCGGTCAGTGTCCGCATTGAGTTCAAGAAG 573046 Query 92036 AAGCAATTTTCCTTGGCTGG 92055 ||| ||| || |||||||| Sbjct 573045 CAGCGATTCTCTTTGGCTGG 573026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356161442657860