Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq7879 163 2e-35
>seq7879
Length=1537716
Score = 163 bits (180), Expect = 2e-35
Identities = 193/260 (74%), Gaps = 6/260 (2%)
Strand=Plus/Minus
Query 91799 CATTTCCCTGTCTTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA 91858
|||||||| ||||| ||||| ||||| |||| ||||||||| |||||| | | |
Sbjct 573282 CATTTCCCAGTCTTCTCCTGTAAAGAAGACTGTGACATCATCACGGACACGGCCTCTAAG 573223
Query 91859 CTGGAACAAAGTGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTG 91918
||||| | ||||| ||||||||||||||| |||| || || ||||| |||||| |||
Sbjct 573222 CTGGAGCGCAGTGGGTTCTACTGGGGTCCTCTGGGTGTGGAAGAGGCTCATCGT---CTG 573166
Query 91919 CGCAACTCGG---CACTGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTG 91975
| ||| || | |||||||| || || || || || ||| | || |||||||| ||
Sbjct 573165 CTCAAAGAGGCTCCTCTGGGCAGTTTCCTGATCCGAGACAGCCGTCAGAAGGACGTGTTC 573106
Query 91976 TTCACGCTGTCGTATCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAGGAC 92035
||||| |||| || ||||| || ||| || |||||||| | ||||| | |||| |
Sbjct 573105 TTCACTTTGTCCTACCACTCCAAGAGCGGCCCGGTCAGTGTCCGCATTGAGTTCAAGAAG 573046
Query 92036 AAGCAATTTTCCTTGGCTGG 92055
||| ||| || ||||||||
Sbjct 573045 CAGCGATTCTCTTTGGCTGG 573026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356161442657860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |