Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 632 3e-176
seq11714 132 7e-26
seq11381 120 4e-22
seq9943 107 3e-18
>seq9898
Length=4754808
Score = 632 bits (700), Expect = 3e-176
Identities = 1337/1978 (68%), Gaps = 29/1978 (1%)
Strand=Plus/Minus
Query 78966 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCT 79025
||| ||||||||| | || || | | ||||||| || || |||||||| | | |
Sbjct 101400 CTGTATGGATCCATTTTGAGCAATGAGCTTATTCTTCATTTCCTCATTCCACAGTCCCCG 101341
Query 79026 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 79085
|| || | | | || ||||| || || || | ||||| ||||| || | |||||
Sbjct 101340 TTCAGTCAGGTCCTTGAGCAGATGTGGGTTTACAATCTGAAACTCTCCGGAGAGGACTCT 101281
Query 79086 CCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGC 79145
|| ||||| || || ||||| || | ||| | || ||||| || || | ||||| ||
Sbjct 101280 GCGTGTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCTAGTATTTGTGC 101221
Query 79146 AGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGAT 79205
|| || || || ||||| || |||| ||| | || || || | ||| | | | ||
Sbjct 101220 TGTGGAAGCAGTAGGCATGGGGGCCAACAACAGGCTGTTCCTCACACCATGTTTAGTAAT 101161
Query 79206 TTTATCTTTTAG-AGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCAT 79264
|| || || || || |||| | ||||| || ||| ||| || | ||| | || |
Sbjct 101160 CTTCTCCTTAAGCAGCTTCC-AGTCCCAGAGCGCAGTCGGCACCTTCTCCCACATGTCGT 101102
Query 79265 ATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTT 79324
|||| ||||| || ||||| | || |||| |||||| |||||||| || || ||||
Sbjct 101101 ATTGCAGAATGCCCTTACTCACTGGAGAACCTGGGTATGTCTCATAAGGCCCGTCTTTTT 101042
Query 79325 CGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTAT 79384
| ||||| || || || ||||| | || |||| || || || || || |||| | |
Sbjct 101041 CTGCTAACTCGCAGCTTGCCTCCAGGGCGGCGTAGTATATTGTCTCAAAGATCTGGATGT 100982
Query 79385 TGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTA 79444
| || || ||||| | || |||||||||||| | |||||| || || ||||| |
Sbjct 100981 TCAGCAGCTGGGCTTCAGGACTTTCAAATGGATAACGCATGAGAATGAAGGCATCTGCGA 100922
Query 79445 ATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAA 79504
|| || || ||||| ||||| || || || | ||| || || | || ||||| || |
Sbjct 100921 GACCCTGCACTCCAATTCCGATTGGCCTGTGGCGCTTGTTCGAGTTCTCGGCTTCAGGGA 100862
Query 79505 TAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACAT 79564
|| || || ||||| || || || || ||||| || || || |||||||| |||
Sbjct 100861 CTGGGTAGTAGTTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACAG 100802
Query 79565 CCTTTAGTTTGAGAAAATCAAATCGTCC-ATCT---ATTACAAACATGTTCAACGCGACA 79620
|| || || ||||| |||| ||| | ||| ||||||| | || | |
Sbjct 100801 AGGCAAGCTTTTTGAAGTCAAA-GGTCCGTTCTGGAGTAACATACATGTTAAGAGCAATA 100743
Query 79621 GATGCCAGATTACAAACGGCTACCTCA--TTAGCATCCGCATATTGTATTATTTCAGTGC 79678
|| |||| ||||| |||||||||||| || || | | ||| | | || |||||||
Sbjct 100742 GAAGCCAAGTTACAGACGGCTACCTCATCTTTGCTT--GTATACTCCACAATCTCAGTGC 100685
Query 79679 AGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 79738
| | |||||| || || || || || ||||| || ||||||||||| ||||||| ||||
Sbjct 100684 ACAAGTTACTGCATTTGATAGTGCCCAAATTCTGCTGATTACTCTTCCTGTTACAGGCAT 100625
Query 79739 CCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 79798
| || || | ||| | ||||| || |||||| ||||||| ||||| || || | ||| |
Sbjct 100624 CTTTGTACAACATGTAAGGAGTTCCTGTTTCAGTCTGAGACTCTATGATGGCATACCACA 100565
Query 79799 CGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTC--TCTT--TCGTATTGTGTATAT 79854
| ||||||| | || || || || | | || | ||||| | || ||
Sbjct 100564 CCTGCTGAGCCTTGA----CCACCCGTTTCACTCTGCCTTCCTGCTCGTAGCGAGTGTAC 100509
Query 79855 AATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATC 79914
| || ||||| || |||||| || || | ||||| || || || ||||||
Sbjct 100508 AGCTTCTCAAACTCCTCCCCCCAACACTCATCCAGCCCAGGGCACTCACTGGGGCACATC 100449
Query 79915 AACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 79974
|| ||||| || | | | || | ||||| || | |||||| ||||| || ||
Sbjct 100448 AAAGACCAGTCCTGGTTGTTTTCCACCCTCTTCATGAACAAATCAGGGATCCATAGGGC- 100390
Query 79975 ATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 80033
||| || || |||| | || |||||||| || || || ||||| || | || |||||
Sbjct 100389 ATAGAAGAGGTCTCGTGCCCTCTGCTCCTCTTTACCAGTGTTCTTCTTTAACTCAAGGAA 100330
Query 80034 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTT 80093
| | | ||| | ||||| || || | ||| ||||| | | || |||||||| ||
Sbjct 100329 GTCAAACACGTCAAAGTGCCATGGCTCAAGGTACATGGCAAAGGCACCAGGTCGTTTATT 100270
Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153
|| || || || | ||| | || ||||| || || || |||| |||||| | || ||
Sbjct 100269 GCCACCTTGGTCCACGTAGCGCGCCGTGTTGTTGTACACCCTCAGCATTGGCACAAGGCC 100210
Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213
||| || ||||||| || || | || |||||||| | | | ||| |||| ||
Sbjct 100209 ATTTGAATTACCATTTGTTCCAGCAATGTAGCTTCCTGTTGATCTAATGCAGCTAACTGC 100150
Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273
|| ||| || || ||||| ||| ||||| | |||||| |||| | |||||||| ||
Sbjct 100149 TACACCAATCCCTCCTGCAGATTTGGAGATGAGAGCGCATTGTTTGAGTGTATCATAAAT 100090
Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 80333
||| || ||||| ||||| ||||| || || || || ||||| | || | | |
Sbjct 100089 GCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAACTAGAGAGCTGTGGTCTGTT 100030
Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393
|| || ||||| || | || ||||| || || || ||||| || |||||||| || ||
Sbjct 100029 GGTGCCTGCATTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAGGTT 99970
Query 80394 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAA 80453
||| |||||||| |||| || ||||| || || ||||| || || || | ||| |
Sbjct 99969 GTAGGTCTCAATGGCTGCATCAATATCAGTTTTGTGGATTCCAACAGCTACTCTCATGAG 99910
Query 80454 CATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAA 80513
||||||||| || | ||| | | |||| ||| ||||||| || ||| || || |
Sbjct 99909 CATGTGCTGTGGACGCTCAGCCACCTTGCCATTGATTTTCAGCAGGTAGGAGCGCTCTAG 99850
Query 80514 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573
|| ||||| ||||| | || || ||||| || | || || || ||| | ||||||||
Sbjct 99849 GGTCTTAAAGCCAAAGAAATTATAAGAAAAATCCCTATCATAGATTATAGCAGAGTTGAG 99790
Query 80574 TTTATCCTTATATTTGTTA--ACTACATCCATGGTGATACTT--GAAATAATCGGAGAAT 80629
|| | | |||| | || | ||| | ||| ||| || || || || || |
Sbjct 99789 GCGGTC--TTTGTTTGCAAGGACAATATCTAGGGT--CTCTTGGGAGATCATGGGGGAGT 99734
Query 80630 GTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 80689
| | ||| ||| || ||||||||||| | ||||||||| || ||||| || | |
Sbjct 99733 GGCGCTTGTTTAAAGGGTTGACATAGTTGAACAGATCCTCCATGACGTCACTGAACACCT 99674
Query 80690 tttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTG 80749
| || || || || || || || || || || || | || || | || ||||||||| |
Sbjct 99673 TCTTGGTCTCTTTATGGAGGTTGGAAACAGCAATGCGTGCAGCCAGAAGGGCATAATCGG 99614
Query 80750 GATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTG 80809
| || | || || ||||| || || || || || || |||||||| || || || |
Sbjct 99613 GGTGCTTAGTGGTTAGTGTGGCAGCAATCTCCGCAGCGAGTGTGTCCAACTCCACAGTGG 99554
Query 80810 TTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGAT 80869
| |||||| | || | |||||||| |||||||| | |||| || || | | |
Sbjct 99553 TCACTCCACTGTACAGACCTTGGATCACCTTCATTGTGATTTGTGCGGGGTCCACAAACT 99494
Query 80870 CAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATGAC 80927
| | ||| | || ||||| | ||| || ||||| ||||||||||||||||||||
Sbjct 99493 CCGCGTTGAGCCCGTAACAGAGCTTTTGGATTCGAGAGGTGATTTTATCAAACATGAC 99436
Score = 102 bits (112), Expect = 1e-16
Identities = 124/169 (73%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844
|||| || || || ||||| || || | |||| ||| | || ||||| ||||| ||||
Sbjct 101662 TCCAGCCATAAAAGTGCATGCTGGTCAATTTGCCATAGTTTGGCTCTGCAATATGAATAT 101603
Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904
| | ||| || || || || ||| |||| || | |||||||||||| || | || ||||
Sbjct 101602 TTAGAGACTGGCTCTGGTCAATGTAGGCACCGCGGTCTGCAGCCATCTTGAGTATAGTCT 101543
Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 78953
| |||| |||||||||| |||||||| | | || | ||| |||||
Sbjct 101542 TCTGTGATATTTCCCAAACTGTTTTATACAGCTGTTTTAAATCATCTGG 101494
>seq11714
Length=3826745
Score = 132 bits (146), Expect = 7e-26
Identities = 142/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAA 79359
|||| |||||||||||| || | | |||| ||||||||| ||||| || || | |||
Sbjct 1501524 TATGATTCATAAGGTCCATCATGGGCAGCTAGTTCACAACTGGCCTCCAAAGCAGCATAA 1501583
Query 79360 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAA 79419
|| ||||| || ||||||| | ||||||| || |||||| || ||||||||||||
Sbjct 1501584 TATATGGTCTCAAAAATCTGGATGTTGAGATGCTGGGCTTCTTCACTTTCAAATGGATAA 1501643
Query 79420 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479
| |||||| || |||||||| | || |||||||| || || |||||||| || | |
Sbjct 1501644 CGCATGAGAATGAAGGCGTCTGCAAGACCCTGAACACCGATTCCAATAGGTCTGTGGCGC 1501703
Query 79480 TTATTAGA 79487
| |||||
Sbjct 1501704 ATGTTAGA 1501711
Score = 91.5 bits (100), Expect = 2e-13
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394
|| || ||||| || | ||||| || ||||| ||||||||||| || || || || |||
Sbjct 1503114 GTGCCAGCATTGAACAGTGTAGGGGAGGCGTGAGTAAACCATTTCTCTGAGAGCAGGTTG 1503173
Query 80395 TACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAAC 80454
|| |||||||| |||| || | ||| || |||||| || || || || | ||| | |
Sbjct 1503174 TAGGTCTCAATGGCTGCGTCCACATCTTGTTTATGAATCCCAACAGCCACTCTCATGAGC 1503233
Query 80455 ATGTGCTGAGGTCTTTCA 80472
|| |||||||| || |||
Sbjct 1503234 ATATGCTGAGGCCTCTCA 1503251
>seq11381
Length=12543884
Score = 120 bits (132), Expect = 4e-22
Identities = 108/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
|||| ||||| || || ||||| |||||| | || || ||||||||||| || | |||||
Sbjct 9286990 CCTCATCTCTGCTGATAAGTTCATTGGAATAAGTAAGACCGGGCATTAGACCCCTCTTTT 9286931
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| |||||| | |||| |||||| || ||||| ||||| ||||| ||||| || ||||| |
Sbjct 9286930 TCAGCCAATAAATGGCCGCAAAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAATG 9286871
Query 50102 CAACAAGTCTCTCTCC 50117
| |||| ||| || ||
Sbjct 9286870 CCACAATTCTTTCACC 9286855
Score = 84.2 bits (92), Expect = 3e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 50458 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 50517
|| || ||||||||||| || ||||||| ||||| || ||||| |||||||||||| |
Sbjct 9285224 ACCTCCTCCACTGTCCAGAAGGATGCCTGTGCCTGCTTGTACATTTTCCAGATGTCAGGG 9285165
Query 50518 TATTGGATTGGGAAAATAACAAATCT 50543
|| || || |||||||| ||||| ||
Sbjct 9285164 TAATGTATGGGGAAAATCACAAACCT 9285139
>seq9943
Length=499256
Score = 107 bits (118), Expect = 3e-18
Identities = 98/124 (79%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
|||||||||| || || ||||||||||| || || ||||||||||| ||||| || || |
Sbjct 292078 CCTCGTCTCTGCTGATGAGTTCGTTGGAGAAGGTCAGTCCGGGCATCAGGCCTCGTTTCT 292019
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| ||||| || |||| || || || ||||| |||||||| || || || ||||| || |
Sbjct 292018 TGAGCCAGAAAATGGCGGCGAAGGATCCAGAGAAGAAGATCCCCTCGACAGCGGCGAACG 291959
Query 50102 CAAC 50105
| ||
Sbjct 291958 CCAC 291955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718119579656800
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