Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq10290 84.2 2e-11
>seq10290
Length=4455921
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195
|||||| || | | | ||| | |||||||||||| ||||| || |||||||| ||
Sbjct 2173311 GCCACCCCTGAGACGAAGAACAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGA 2173252
Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255
||| | | ||||||| | || || ||||| | ||||| | || || || ||
Sbjct 2173251 CAGAGTACGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGGGG 2173192
Query 15256 AATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
||| ||||| ||||| || ||| ||| || | || ||||| || || || ||
Sbjct 2173191 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCAC 2173132
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| | || ||||| || || || || ||||| ||||| || ||||||
Sbjct 2173131 CTCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCATA 2173083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362105838339420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |