Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq11381 104 2e-17 >seq11381 Length=12543884 Score = 104 bits (114), Expect = 2e-17 Identities = 112/147 (76%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 21487 ACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAA 21546 |||| | ||||| |||| || || || | |||||| ||| | || | ||||||||||| Sbjct 9287000 ACAAATCTAACCT-CATCTCTGCTGATAAGTTCATTGGAATAAGTAAGACCGGGCATTAG 9286942 Query 21547 TCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAAC 21606 || |||||||| | |||| | || | |||||| | ||| || |||||||| ||||| || Sbjct 9286941 ACCCCTCTTTTTCAGCCAATAAATGGCCGCAAAGGATCCAGAGAAGAAAATTCCCTCTAC 9286882 Query 21607 GGCAGCAAATGCAACTAATCGTTCACC 21633 || |||||||| || | || |||||| Sbjct 9286881 AGCTGCAAATGCCACAATTCTTTCACC 9286855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531790297608800