Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq10290 98.7 1e-15 >seq10290 Length=4455921 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | || || ||| | || ||| | || | || | | Sbjct 2172856 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAAACTATTACCCTTGAGGTTGAGCCCAGT 2172915 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | || ||| |||||| ||||| ||||| || || || |||||| Sbjct 2172916 GACACCATTGAAAACGTGAAAGCTAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAA 2172975 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||| || |||| | ||||| || || || |||| | | | || |||||| ||| Sbjct 2172976 CAAAGGCTTATTTTTGCTGGCAAGCAGCTTGAGGATGGGCGTACCCTCTCCGACTACAAC 2173035 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| ||| | || | |||||| | || ||||| || Sbjct 2173036 ATCCAGAAAGAATCCACTCTTCACTTAGTCCTGCGCCTCAGAGGTGG 2173082 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| | ||||| || | ||||| | || | || | | Sbjct 2171165 ATGCAGATCTTTGTGAAAACCCTCACTGGGAAGACCATCACTCTGGAGGTGGAGCCCAGT 2171224 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || ||||| ||||| ||||| || || || ||||| Sbjct 2171225 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 2171284 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | | |||||| || || ||||||| | | | || |||||| || Sbjct 2171285 CAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAAGATGGGCGCACCCTCTCCGACTACAAT 2171344 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| || || || ||||||| |||||| | || || || || Sbjct 2171345 ATCCAAAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGG 2171391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478562957886400