Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 143 3e-29
seq10290 109 5e-19
seq11714 95.1 1e-14
>seq9898
Length=4754808
Score = 143 bits (158), Expect = 3e-29
Identities = 680/1067 (64%), Gaps = 30/1067 (3%)
Strand=Plus/Minus
Query 145109 GTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATG 145168
||| ||| ||| | ||||| || ||||| || ||||| || || | || || ||||||
Sbjct 101261 GTGTAGGCTTCGATGGACTCATTGTTGCCTAGTATTTGTGCTGTGGAAGCAGTAGGCATG 101202
Query 145169 TACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCC 145228
|||| ||| | || | || || || || | || | ||||| ||| |
Sbjct 101201 GGGGCCAACAACAGGCTGTTCCTCACACCATGTTTAGTAATCTTCTCCTTAAGCAGCTTC 101142
Query 145229 CAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTG 145288
|| ||||| |||| ||||||| | |||||||||||||| |||| |||||||| ||
Sbjct 101141 CAGTCCCAGAGCGCAGTCGGCACCTTCTCCCACATGTCGTATTGCAGAATGCCCTTACTC 101082
Query 145289 GCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG-GCGAGCTCGCAACTCGC 145347
| || ||| | | | ||| |||| |||| || | |||||| || ||
Sbjct 101081 ACTGGAGAACCTGGGTATGTCTCATAAG-GCCCGTCTTTTTCTGCTAACTCGCAGCTTGC 101023
Query 145348 CTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATC 145407
|||||| ||| || | || |||||||| || || |||| |||||| ||||||
Sbjct 101022 CTCCAGGGCGGCGTAGTATATTGTCTCAAAGATCTGGATGTTCAGCAGCTGGGCTTCAGG 100963
Query 145408 GCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCC 145467
|| || | || |||| || | || ||||| ||||| ||||| | ||| | ||
Sbjct 100962 ACTTTCAAATGGATAACGCATGAGAATGAAGGCATCTGCGAGACCCTGCACTCCAATTCC 100903
Query 145468 GATGGGCCGATGTTTCATGTTG-----CTCATCCTCGCCGACTCGATAGGATATCGATTA 145522
||| |||| || | |||| ||| | || |||| | ||| | |||
Sbjct 100902 GATTGGCCTGTGGCGCTTGTTCGAGTTCTCGGCTTCAGGGACTGGGTAGTAG-----TTA 100848
Query 145523 CGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAA-CTTTTC 145581
||| || || || || | ||||| || | ||| || || | | |||| |||||
Sbjct 100847 ATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACA-GAGGCAAGCTTTTT 100789
Query 145582 AAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATT 145641
|||||||| | | | | | | || ||| | || | || || || ||||| ||
Sbjct 100788 GAAGTCAAAG-GTCCGTTCTGGAGTAACATACA--TGTTAAGAGCAATAGAAGCCAAGTT 100732
Query 145642 ACAAACTGCCGTCTCCTCGGCGTCGCT-GTATTGT--ACGATCTCGGCGCACAAATTGCT 145698
||| || || ||| || | ||| |||| | || ||||| | |||||| || ||
Sbjct 100731 ACAGACGGCTACCTCATCT---TTGCTTGTATACTCCACAATCTCAGTGCACAAGTTACT 100675
Query 145699 ACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAG 145758
|||||||| || |||| ||| ||||||||||| |||||||| || || || ||||| |
Sbjct 100674 GCATTTGATAGTGCCCAAATTCTGCTGATTACTCTTCCTGTTACAGGCATCTTTGTACAA 100615
Query 145759 CATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGC 145818
|||||| || || || || ||| | ||| | ||| | || | ||| ||
Sbjct 100614 CATGTAAGGAGTTCCTGTTTCAGTCTGAGACTCTATGATGGCATACCACACCTGCTGAGC 100555
Query 145819 ACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGC 145878
||| | | | | ||| || | ||||| |||| |||| ||||||| |
Sbjct 100554 CTTGACCACCCGTTTCACTCTGCCTTCCTGCTCGTAGCGAGTGTACAGCTTCTCAAACTC 100495
Query 145879 GGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCC 145938
|| | || || ||| || || |||| |||| ||||||| ||||| |
Sbjct 100494 CTCCCCCCAACACTCATCCAGCCCAGGGCACTCACTGGGGCACATCAAAGACCAGTCCTG 100435
Query 145939 GTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAG--TCG 145996
|||| | || | || ||| |||||||| || | ||| || || || | | | |||
Sbjct 100434 GTTGTTTTCCACCCTCTTCATGAACAAATCAGGGATCCATAGGGCATAGAAGAGGTCTCG 100375
Query 145997 CGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTATAGATGTCC 146056
|| || ||| ||||| ||| |||| ||| || | ||| | | | | |||
Sbjct 100374 TGCCCTCTGC--TCCTCTTTACCAGTGTTCTTCTTTAACTCAAGGAAGTCAAACACGTCA 100317
Query 146057 GCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGT---TTGCCACCCTGGTCC 146113
|||||| || |||| || | ||| | ||| || |||| |||||||| ||||||
Sbjct 100316 AAGTGCCATGGCTCAAGGTACATGGCAAAGGCACCAGGTCGTTTATTGCCACCTTGGTCC 100257
Query 146114 ACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCC 146160
|||| || || ||||||| | || | || ||| ||| | | |||
Sbjct 100256 ACGTAGCGCGCCGTGTTGTTGTACACCCTCAGCATTGGCACAAGGCC 100210
>seq10290
Length=4455921
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| | || |||||| || | ||| | ||| ||||||||||| || ||||| |||
Sbjct 2171392 GCCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTTTGGATATTGTAGTCGGA 2171333
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||||||| || || ||||||||||| || |||| || | |||||| || || ||
Sbjct 2171332 GAGGGTGCGCCCATCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGG 2171273
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| ||| || ||| | | ||| | || || ||| ||| |
Sbjct 2171272 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCAC 2171213
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || ||||| || || ||||||||
Sbjct 2171212 CTCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2171165
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | || |||||| || | ||| | ||| || || || || |||||||| ||
Sbjct 2170935 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAG 2170876
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| || |||| || | |||||| || || ||
Sbjct 2170875 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGA 2170816
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| || || ||| | | || | || ||| ||| ||| |
Sbjct 2170815 ATGCCTTCCTTGTCCTGAATCTTGGCCTTAACATTTTCAATCGTGTCGCTGGGCTCCACC 2170756
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | |||||| || || || ||||| || || ||||||||
Sbjct 2170755 TCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTCACAAAGATCTGCAT 2170709
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | || |||||| || | ||| | ||| || || || ||||||||||| || |
Sbjct 2171163 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAGTCAGAC 2171104
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||| || ||||||||||| || | || | | |||||| || || ||
Sbjct 2171103 AGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGATCTGGGGGA 2171044
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| || || ||| | | ||| | || ||| ||| ||| |
Sbjct 2171043 ATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACC 2170984
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || ||||| || || ||||||||
Sbjct 2170983 TCCAAAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2170937
>seq11714
Length=3826745
Score = 95.1 bits (104), Expect = 1e-14
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727
|||||| ||| ||||| | ||||| || || |||||||||| || | ||| ||||| |
Sbjct 1502035 TGTATTCTACAATCTCAGTGCACAGGTTACTGGATTTGATGGTGCCTAAATTCTGCTGGT 1502094
Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTC 145779
|||| ||||| || || || || |||||||||||||||||| || |||||
Sbjct 1502095 TACTCTTCCTATTACATGCATCTTTGTAGAGCATGTACGGTGTCCCTGTCTC 1502146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471914739340800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |