Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq3442 122 6e-23
seq10883 113 3e-20
seq5759 113 3e-20
seq4807 113 3e-20
seq934 113 3e-20
seq10290 111 1e-19
seq12961 95.1 8e-15
seq5437 95.1 8e-15
seq11493 89.7 3e-13
seq8102 87.8 1e-12
seq11924 86.0 4e-12
seq10730 86.0 4e-12
seq9846 86.0 4e-12
seq9138 86.0 4e-12
seq9105 86.0 4e-12
seq7656 86.0 4e-12
seq4773 86.0 4e-12
seq579 86.0 4e-12
seq13146 84.2 1e-11
seq10608 84.2 1e-11
seq1000 84.2 1e-11
seq16509 82.4 5e-11
seq13390 82.4 5e-11
seq4440 82.4 5e-11
seq1111 82.4 5e-11
>seq3442
Length=1619139
Score = 122 bits (134), Expect = 6e-23
Identities = 130/172 (76%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378
||||||| || | ||| || || ||||| ||||||||||| ||||| ||| ||||||||
Sbjct 1245781 ACCCGACCAAGTTTTTTGGTTGTGAACTGGGCGCTCAGACCCAGTTCGATTCCAAAAACG 1245722
Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438
| |||| |||||| ||||| || || | | ||||||||||||| | || ||||| |
Sbjct 1245721 ACCGCTACATCGTCAACGGCTCCCACGAGGCCAACAAGCTGCAGGACATGCTCGACGGGT 1245662
Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCT 6490
| || || || ||||||||||| || || || ||||| || || || ||
Sbjct 1245661 TCATACGGAAATTTGTGCTGTGCTCCGAGTGTGACAACCCCGAAACTGATCT 1245610
>seq10883
Length=362615
Score = 113 bits (124), Expect = 3e-20
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||| || ||| |||||| || ||||||||
Sbjct 215492 AAGCCCGTTCCCTTGGCTGTGGTTTCGCAAGGGGGTATATAGGGACAGTGGGAATCTCGT 215433
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 215432 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 215398
>seq5759
Length=17482
Score = 113 bits (124), Expect = 3e-20
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||| || ||| |||||| || ||||||||
Sbjct 1251 AAGCCCGTTCCCTTGGCTGTGGTTTCGCAAGGGGGTATATAGGGACAGTGGGAATCTCGT 1192
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 1191 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 1157
>seq4807
Length=20766
Score = 113 bits (124), Expect = 3e-20
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||| || ||| |||||| || ||||||||
Sbjct 2986 AAGCCCGTTCCCTTGGCTGTGGTTTCGCAAGGGGGTATATAGGGACAGTGGGAATCTCGT 2927
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 2926 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 2892
Score = 98.7 bits (108), Expect = 7e-16
Identities = 68/77 (88%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 9385 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTCGACTATCGGTCTCGT 9444
Query 20007 GGTAATATTTAGCCTTA 20023
| ||||||||||||
Sbjct 9445 GCCGGTATTTAGCCTTA 9461
>seq934
Length=61422
Score = 113 bits (124), Expect = 3e-20
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||| || ||| |||||| || ||||||||
Sbjct 5225 AAGCCCGTTCCCTTGGCTGTGGTTTCGCAAGGGGGTATATAGGGACAGTGGGAATCTCGT 5166
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 5165 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 5131
>seq10290
Length=4455921
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||||| ||||| || | ||| || ||| || || ||||| ||||| ||||
Sbjct 2171165 TACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAGTCAG 2171106
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| | || |||| || | || || |||||||| || || | || ||||| | ||
Sbjct 2171105 ACAGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGATCTGGGG 2171046
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | |||||| |||||| ||| || ||||||||||| | || || | || |
Sbjct 2171045 GAATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCA 2170986
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || || || || || || || || | ||||||||| || ||||||||
Sbjct 2170985 CCTCCAAAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2170937
Score = 86.0 bits (94), Expect = 4e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| | |||| || || ||||||||| || || || || ||||| || |
Sbjct 2173084 TACCACCTCTGAGGCGCAGGACTAAGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGG 2173025
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | ||| | || || | || || || ||||| || || | ||||||||| | ||
Sbjct 2173024 AGAGGGTACGCCCATCCTCAAGCTGCTTGCCAGCAAAAATAAGCCTTTGTTGATCTGGGG 2172965
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | |||||| |||||| ||| || ||||| || | | || || | ||||
Sbjct 2172964 GAATGCCTTCCTTGTCCTGAATCTTAGCTTTCACGTTTTCAATGGTGTCACTGGGCTCAA 2172905
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
| || | ||||||||||| || || | ||| || || || || ||||||
Sbjct 2172904 CCTCAAGGGTAATAGTTTTGCCGGTGAGGGTCTTGACAAAGATTTGCATG 2172855
>seq12961
Length=193462
Score = 95.1 bits (104), Expect = 8e-15
Identities = 78/95 (82%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||| |||||||||||||||||||||||| || ||| |||||| || ||||||||
Sbjct 192346 AAGGCCGTTCCCTTGGCTGTGGTTTCGCAAGGGGGTATATAGGGACAGTGGGAATCTCGT 192405
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| |||| |||| |||||||||||||||||
Sbjct 192406 TCATCCATTCACACGCGACACTAATTAGATGACGA 192440
>seq5437
Length=1481229
Score = 95.1 bits (104), Expect = 8e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||
Sbjct 297257 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACAGTACTTGTTGACTATCAGTCTCAT 297198
Query 20007 GGTAATATTTAGCCTTA 20023
| | ||||||| ||||
Sbjct 297197 GTCAGTATTTAGTCTTA 297181
>seq11493
Length=3875266
Score = 89.7 bits (98), Expect = 3e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1561877 CTCTCTCTTCAACGTTCTTTTCAACTTTCCCTTACGGTACTTGTCGACTATCGGTCTCAT 1561936
Query 20007 GGTAATATTTAGCCTTA 20023
| ||||||||||||
Sbjct 1561937 ACCAGTATTTAGCCTTA 1561953
>seq8102
Length=7238142
Score = 87.8 bits (96), Expect = 1e-12
Identities = 68/80 (85%), Gaps = 6/80 (8%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG- 20005
|||||||||| |||||||||||||||||||||||||||||||||| ||||| || | |
Sbjct 5327118 CTCTCTCTTCCAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTGACTATCAGTTTTGT 5327177
Query 20006 --CGGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 5327178 TTCGG---TATTTAGCCTTA 5327194
>seq11924
Length=265747
Score = 86.0 bits (94), Expect = 4e-12
Identities = 66/76 (87%), Gaps = 2/76 (3%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCG-CTATCGGTCTCG 20005
|||||||||||||||||||||||||||||||| || |||||| |||| || ||| |||||
Sbjct 260644 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACCGTACTT-TTCGACTGTCGCTCTCG 260702
Query 20006 CGGTAATATTTAGCCT 20021
| | ||||||||||
Sbjct 260703 TGCAAGTATTTAGCCT 260718
>seq10730
Length=375406
Score = 86.0 bits (94), Expect = 4e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||| ||||||||| || | | | ||||| |||||||||||||
Sbjct 343233 CTCTCTCTTCAAAGTTCTTATCAACTTTCTCTTATGATTCTTGTCGACTATCGGTCTCGC 343174
Query 20007 GGTAATATTTAGCCTTA 20023
| | ||||||||||||
Sbjct 343173 GCTGGTATTTAGCCTTA 343157
>seq9846
Length=516713
Score = 86.0 bits (94), Expect = 4e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||| | ||||||||||||||||||| ||||| ||||| |||||||||| |
Sbjct 334202 CTCTCTCTTCGAGGTTCTTTTCAACTTTCCCTTACGGTTCTTGTCGACTATCGGTCTTGT 334143
Query 20007 GGTAATATTTAGCCTTA 20023
| | ||||||||||||
Sbjct 334142 GCTGGTATTTAGCCTTA 334126
>seq9138
Length=5285520
Score = 86.0 bits (94), Expect = 4e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||| ||||||||| ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 3720487 CTCTGTCTTCAAAGCTCTTTTCAACTTTCCCTTACGGTACTTGTCGACTATCGGTCTCGT 3720428
Query 20007 GGTAATATTTAGCCTTA 20023
| |||||| |||||
Sbjct 3720427 GCCGGTATTTAACCTTA 3720411
>seq9105
Length=686709
Score = 86.0 bits (94), Expect = 4e-12
Identities = 66/77 (86%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 19946 TCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005
||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct 531007 TCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGCTCTTGTCGACTATCGGTCTCG 531066
Query 20006 CGGTAATATTTAGCCTT 20022
| |||||||||||
Sbjct 531067 -TGCCGTATTTAGCCTT 531082
>seq7656
Length=1346092
Score = 86.0 bits (94), Expect = 4e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||
Sbjct 41458 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTCGACTATTGGACTCGT 41399
Query 20007 GGTAATATTTAGCCTTA 20023
| | ||||||||||
Sbjct 41398 GCCGGTTTTTAGCCTTA 41382
>seq4773
Length=1511541
Score = 86.0 bits (94), Expect = 4e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||||||||||||||||||||||| || |||||||| ||||| |||||
Sbjct 537337 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACAGTACTTGTCGACTATCAGTCTCAT 537278
Query 20007 GGTAATATTTAGCCTTA 20023
| | |||||| |||||
Sbjct 537277 GCCAGTATTTATCCTTA 537261
>seq579
Length=68278
Score = 86.0 bits (94), Expect = 4e-12
Identities = 67/78 (86%), Gaps = 4/78 (5%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCG-CTATCGGTCTCG 20005
|| ||||||||||||||||||||||||||||| ||| ||| |||| ||||||||||||
Sbjct 68156 CTTTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGATAC---TTCGACTATCGGTCTCG 68100
Query 20006 CGGTAATATTTAGCCTTA 20023
| | ||||||| |||||
Sbjct 68099 TGCTGATATTTAACCTTA 68082
>seq13146
Length=180689
Score = 84.2 bits (92), Expect = 1e-11
Identities = 66/78 (85%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAA-GTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005
||||||||||||| ||||||||||||||||||| || | |||||| ||||||||||||
Sbjct 123551 CTCTCTCTTCAAAAGTTCTTTTCAACTTTCCCTTACAGCACTTGTCAACTATCGGTCTCG 123492
Query 20006 CGGTAATATTTAGCCTTA 20023
| ||||||||||||
Sbjct 123491 TGCCGGTATTTAGCCTTA 123474
>seq10608
Length=394754
Score = 84.2 bits (92), Expect = 1e-11
Identities = 65/76 (86%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct 248583 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGCTCTTGTCGACTATCGGTCTCG- 248525
Query 20007 GGTAATATTTAGCCTT 20022
| |||||||||||
Sbjct 248524 TGCCGTATTTAGCCTT 248509
>seq1000
Length=2939233
Score = 84.2 bits (92), Expect = 1e-11
Identities = 67/78 (86%), Gaps = 2/78 (3%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCG-CTATCGGTCTCG 20005
||||||||||||||||||||||||||||| | ||||||||| |||| || ||||||| |
Sbjct 1890452 CTCTCTCTTCAAAGTTCTTTTCAACTTTCTTTTACGGTACTT-TTCGACTGTCGGTCTTG 1890394
Query 20006 CGGTAATATTTAGCCTTA 20023
|| ||||||||||||
Sbjct 1890393 TGGCGGTATTTAGCCTTA 1890376
>seq16509
Length=2056469
Score = 82.4 bits (90), Expect = 5e-11
Identities = 79/97 (81%), Gaps = 7/97 (7%)
Strand=Plus/Plus
Query 25901 TAAGCCCGTTCCCTT-GGCTGTGGTTTCGCTAG----ATAGTAG-ATAGGGGGTAATCTC 25954
|||||||| |||||| |||||||||||| | | ||| || | || ||| ||| ||
Sbjct 1486288 TAAGCCCGCTCCCTTCGGCTGTGGTTTCTCGGGGGGCATATAAGGACAGCGGGAAAT-TC 1486346
Query 25955 GTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
||| |||| ||||||||||||||||||||||||||||
Sbjct 1486347 GTTCATCCATTCATGCGCGTCACTAATTAGATGACGA 1486383
>seq13390
Length=2852176
Score = 82.4 bits (90), Expect = 5e-11
Identities = 67/80 (84%), Gaps = 6/80 (8%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG- 20005
|||||||||||||||||||||||||||||||| |||||||||| |||| ||||||
Sbjct 696640 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTTCGGTACTTGTAGAGTATCAGTCTCGT 696699
Query 20006 --CGGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 696700 ACCGG---TATTTAGCCTTA 696716
>seq4440
Length=1539330
Score = 82.4 bits (90), Expect = 5e-11
Identities = 65/77 (84%), Gaps = 2/77 (3%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||| ||||||||||| |||||||||||| || ||||||||||| |||||||||||
Sbjct 537083 CTCTTTCTTCAAAGTTATTTTCAACTTTCTCTTACGGTACTTGTCGACTATCGGTCTCAT 537142
Query 20007 GGTAATATTTAGCCTTA 20023
|| ||||||||||||
Sbjct 537143 CGT--TATTTAGCCTTA 537157
>seq1111
Length=8431696
Score = 82.4 bits (90), Expect = 5e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008
||||||||||||||||||||||||||| || ||||| ||||| |||| |||||| |
Sbjct 8209442 CTCTCTTCAAAGTTCTTTTCAACTTTCTCTTACGGTGCTTGTCAACTATTGGTCTCATGC 8209501
Query 20009 TAATATTTAGCCTTA 20023
|||||||||||||
Sbjct 8209502 CGATATTTAGCCTTA 8209516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334879354351220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |