Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 637 6e-178
seq11714 122 1e-22
seq11381 120 4e-22
seq9943 96.9 4e-15
>seq9898
Length=4754808
Score = 637 bits (706), Expect = 6e-178
Identities = 1327/1972 (67%), Gaps = 17/1972 (1%)
Strand=Plus/Minus
Query 62098 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 62157
||| ||||||||| | || || | | ||||||| || || |||||||| | | |
Sbjct 101400 CTGTATGGATCCATTTTGAGCAATGAGCTTATTCTTCATTTCCTCATTCCACAGTCCCCG 101341
Query 62158 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 62217
|| || | | | || ||||| || || || | ||||| ||||| || | |||||
Sbjct 101340 TTCAGTCAGGTCCTTGAGCAGATGTGGGTTTACAATCTGAAACTCTCCGGAGAGGACTCT 101281
Query 62218 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 62277
|| ||||| || || ||||| || | ||| | |||||||| || || | ||||| ||
Sbjct 101280 GCGTGTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCTAGTATTTGTGC 101221
Query 62278 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 62337
|| || ||||| ||||| || |||| ||| | || || || | ||| | | | | ||
Sbjct 101220 TGTGGAAGCAGTAGGCATGGGGGCCAACAACAGGCTGTTCCTCACACCATGTTTAGTAAT 101161
Query 62338 TTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNN 62397
|| || || || | | ||| | ||| || | | ||| ||
Sbjct 101160 CTTCTCCTTAAGCAGCTTCCAGTCCCAGAGCGCAGTCGGCACCTTCTCCCACATGTCGTA 101101
Query 62398 TTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTC 62457
||| ||||| || ||||| | || ||| ||||| || || || || || || ||
Sbjct 101100 TTGCAGAATGCCCTTACTCACTGGAGAACCTGGGTATGTCTCATAAGGCCCGTCTTTTTC 101041
Query 62458 AGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATT 62517
|||| || || || ||||| | || |||| || || || || ||||||| | ||
Sbjct 101040 TGCTAACTCGCAGCTTGCCTCCAGGGCGGCGTAGTATATTGTCTCAAAGATCTGGATGTT 100981
Query 62518 TAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAA 62577
|| || ||||| | || |||||||||||| | |||||| || || ||||| |
Sbjct 100980 CAGCAGCTGGGCTTCAGGACTTTCAAATGGATAACGCATGAGAATGAAGGCATCTGCGAG 100921
Query 62578 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 62637
|| || || ||||| ||||| || || || | ||| || ||| | || ||||| || |
Sbjct 100920 ACCCTGCACTCCAATTCCGATTGGCCTGTGGCGCTTGTTCGAGTTCTCGGCTTCAGGGAC 100861
Query 62638 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATC 62697
|| || || ||||| || || || || ||||| ||||| ||||||||||| |||
Sbjct 100860 TGGGTAGTAGTTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACAGA 100801
Query 62698 CTTCAGTTTGAGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAATGCAACAGA 62754
|| || || ||||| || ||| | ||| ||||||| | |||| |||
Sbjct 100800 GGCAAGCTTTTTGAAGTCAAAGGTCCGTTCTGGAGTAACATACATGTTAAGAGCAATAGA 100741
Query 62755 TGCCAGATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAA 62812
|||| ||||| ||||||||||||| | || | | ||| | | |||||||||||
Sbjct 100740 AGCCAAGTTACAGACGGCTACCTCATCTTTGCTT--GTATACTCCACAATCTCAGTGCAC 100683
Query 62813 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 62872
| ||||| || ||||| || || ||||| || ||||||||||| ||||||| |||||
Sbjct 100682 AAGTTACTGCATTTGATAGTGCCCAAATTCTGCTGATTACTCTTCCTGTTACAGGCATCT 100623
Query 62873 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 62932
|| || | ||| | ||||| || |||||| ||||||| ||||| || || | ||| ||
Sbjct 100622 TTGTACAACATGTAAGGAGTTCCTGTTTCAGTCTGAGACTCTATGATGGCATACCACACC 100563
Query 62933 ACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGT 62992
||||||| | | ||| ||| ||| ||||| | || ||||
Sbjct 100562 TGCTGAGCCTTGACCACCCGTTTCACTCTGCCTTCCTGCTCGTAGCGAGTGTACAGCTTC 100503
Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052
|| ||||| || |||||| | ||||| ||||| || ||| || |||||||| |||
Sbjct 100502 TCAAACTCCTCCCCCCAACACTCATCCAGCCCAGGGCACTCACTGGGGCACATCAAAGAC 100443
Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63111
|| || || | | ||| | ||||| || | |||||| ||||| || || ||| ||
Sbjct 100442 CAGTCCTGGTTGTTTTCCACCCTCTTCATGAACAAATCAGGGATCCATAGGGC-ATAGAA 100384
Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171
|| |||| | || || ||||| || || || ||||| || | || ||||| | |
Sbjct 100383 GAGGTCTCGTGCCCTCTGCTCCTCTTTACCAGTGTTCTTCTTTAACTCAAGGAAGTCAAA 100324
Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231
| ||| | ||||| || || | ||| ||||| | | ||||| ||||| || || ||
Sbjct 100323 CACGTCAAAGTGCCATGGCTCAAGGTACATGGCAAAGGCACCAGGTCGTTTATTGCCACC 100264
Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291
|| || | ||| | || ||||| || || || |||| |||||| | || ||||| ||
Sbjct 100263 TTGGTCCACGTAGCGCGCCGTGTTGTTGTACACCCTCAGCATTGGCACAAGGCCATTTGA 100204
Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63351
||||||| || || | || |||||||| | | | ||| |||| || || |||
Sbjct 100203 ATTACCATTTGTTCCAGCAATGTAGCTTCCTGTTGATCTAATGCAGCTAACTGCTACACC 100144
Query 63352 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 63411
|| || ||||| ||| ||||| | |||||| |||| | |||||||| ||||| ||
Sbjct 100143 AATCCCTCCTGCAGATTTGGAGATGAGAGCGCATTGTTTGAGTGTATCATAAATGCCATC 100084
Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63471
|| || |||||| ||||| || || || || ||||| | || | | | || ||
Sbjct 100083 AATGCTGTCATCCTTCATGGCCAGCAGGAAGCAACTAGAGAGCTGTGGTCTGTTGGTGCC 100024
Query 63472 CGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63531
||||| || | || ||||| || ||||| ||||| || ||||| || || ||||| ||
Sbjct 100023 TGCATTGAACAGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAGGTTGTAGGT 99964
Query 63532 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63591
|||||| |||| || ||||| || || ||||| || || || | ||| | ||||||
Sbjct 99963 CTCAATGGCTGCATCAATATCAGTTTTGTGGATTCCAACAGCTACTCTCATGAGCATGTG 99904
Query 63592 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 63651
||| || | ||| | | |||| || ||||||| || |||||| || | || ||
Sbjct 99903 CTGTGGACGCTCAGCCACCTTGCCATTGATTTTCAGCAGGTAGGAGCGCTCTAGGGTCTT 99844
Query 63652 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 63711
||| ||||| | || || ||||| || | || || || ||| | |||||||| ||
Sbjct 99843 AAAGCCAAAGAAATTATAAGAAAAATCCCTATCATAGATTATAGCAGAGTTGAGGCGGTC 99784
Query 63712 CTTATATTTGTTA--ACTACATCCATGGTAATACTT--GAAATAATAGGAAAATGTTTCC 63767
| | |||| | || | ||| | ||| ||| || || || || | || |
Sbjct 99783 --TTTGTTTGCAAGGACAATATCTAGGGT--CTCTTGGGAGATCATGGGGGAGTGGCGCT 99728
Query 63768 CATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttG 63827
||| ||| |||||||||||||| | ||||||||| || ||||| || | || || |
Sbjct 99727 TGTTTAAAGGGTTGACATAGTTGAACAGATCCTCCATGACGTCACTGAACACCTTCTTGG 99668
Query 63828 TTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTT 63887
| ||||| || || || || || || || | || || |||| ||||||||| || || |
Sbjct 99667 TCTCTTTATGGAGGTTGGAAACAGCAATGCGTGCAGCCAGAAGGGCATAATCGGGGTGCT 99608
Query 63888 GTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACAC 63947
|| || ||||| || || || || || || |||||||| || || || || || |
Sbjct 99607 TAGTGGTTAGTGTGGCAGCAATCTCCGCAGCGAGTGTGTCCAACTCCACAGTGGTCACTC 99548
Query 63948 CATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGT 64007
|| | || | |||||||| |||||||| | |||| || || | | || | ||
Sbjct 99547 CACTGTACAGACCTTGGATCACCTTCATTGTGATTTGTGCGGGGTCCACAAACTCCGCGT 99488
Query 64008 TTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGAC 64059
| | || ||||| | ||| || ||||| ||||||||||||||||||||
Sbjct 99487 TGAGCCCGTAACAGAGCTTTTGGATTCGAGAGGTGATTTTATCAAACATGAC 99436
Score = 107 bits (118), Expect = 2e-18
Identities = 125/169 (74%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976
|||| || ||||| ||||| || || | |||| ||| | || ||||| ||||| ||||
Sbjct 101662 TCCAGCCATAAAAGTGCATGCTGGTCAATTTGCCATAGTTTGGCTCTGCAATATGAATAT 101603
Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036
| | ||| || || || || ||| |||| || | |||||||||||| || | || ||||
Sbjct 101602 TTAGAGACTGGCTCTGGTCAATGTAGGCACCGCGGTCTGCAGCCATCTTGAGTATAGTCT 101543
Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 62085
| |||| |||||||||| |||||||| | | || | ||| |||||
Sbjct 101542 TCTGTGATATTTCCCAAACTGTTTTATACAGCTGTTTTAAATCATCTGG 101494
>seq11714
Length=3826745
Score = 122 bits (134), Expect = 1e-22
Identities = 141/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 62430 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62489
|||||| || || ||||| || | |||||||||||||||| ||||| || ||| | |
Sbjct 1501522 CATATGATTCATAAGGTCCATCATGGGCAGCTAGTTCACAACTGGCCTCCAAAGCAGCAT 1501581
Query 62490 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGAT 62549
|||| ||||| || || |||| | || |||| || ||||| || ||||||||||
Sbjct 1501582 AATATATGGTCTCAAAAATCTGGATGTTGAGATGCTGGGCTTCTTCACTTTCAAATGGAT 1501641
Query 62550 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62609
|| | |||||| || |||||||| | || |||||||| || || |||||||| || |
Sbjct 1501642 AACGCATGAGAATGAAGGCGTCTGCAAGACCCTGAACACCGATTCCAATAGGTCTGTGGC 1501701
Query 62610 TCTTATTAGA 62619
| | |||||
Sbjct 1501702 GCATGTTAGA 1501711
Score = 100 bits (110), Expect = 4e-16
Identities = 105/138 (76%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTG 63526
|| || ||||| || | ||||| || ||||||||||||||||| || || || || |||
Sbjct 1503114 GTGCCAGCATTGAACAGTGTAGGGGAGGCGTGAGTAAACCATTTCTCTGAGAGCAGGTTG 1503173
Query 63527 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63586
|| |||||||| |||| ||| | ||| || |||||| || || || || | ||| | |
Sbjct 1503174 TAGGTCTCAATGGCTGCGTCCACATCTTGTTTATGAATCCCAACAGCCACTCTCATGAGC 1503233
Query 63587 ATGTGCTGAGGTCTTTCA 63604
|| |||||||| || |||
Sbjct 1503234 ATATGCTGAGGCCTCTCA 1503251
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 62792 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 62851
|||| || ||||||||||| || ||||| | |||||||| |||||||| || || |||
Sbjct 1502037 TATTCTACAATCTCAGTGCACAGGTTACTGGATTTGATGGTGCCTAAATTCTGCTGGTTA 1502096
Query 62852 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 62911
||||| | ||||| ||||| || || || ||| | || || || || || |||| ||
Sbjct 1502097 CTCTTCCTATTACATGCATCTTTGTAGAGCATGTACGGTGTCCCTGTCTCTGTCTGTGAC 1502156
Query 62912 TCTATAATCGCTTTCCA 62928
|| ||||| || | |||
Sbjct 1502157 TCAATAATGGCATACCA 1502173
>seq11381
Length=12543884
Score = 120 bits (132), Expect = 4e-22
Identities = 108/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742
|||| ||||| || || | ||| |||||| | || || ||||||||||| || | |||||
Sbjct 9286990 CCTCATCTCTGCTGATAAGTTCATTGGAATAAGTAAGACCGGGCATTAGACCCCTCTTTT 9286931
Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802
| |||||| | |||| |||||| |||||||| ||||||||||| ||||| || ||||| |
Sbjct 9286930 TCAGCCAATAAATGGCCGCAAAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAATG 9286871
Query 32803 CAATAAGTCTCTCTCC 32818
| | || ||| || ||
Sbjct 9286870 CCACAATTCTTTCACC 9286855
Score = 86.0 bits (94), Expect = 8e-12
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 33157 CCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCAT 33216
|||| || ||||||||||| || ||||||| ||||| || ||||| ||||||||||||
Sbjct 9285226 CCACCTCCTCCACTGTCCAGAAGGATGCCTGTGCCTGCTTGTACATTTTCCAGATGTCAG 9285167
Query 33217 GATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATTGGTTC 33271
| || || || || ||||| ||||| || | || |||| | ||| | ||| ||
Sbjct 9285166 GGTAATGTATGGGGAAAATCACAAACCTTCTGGGGTTTTCTTGAAGCAGTGGCTC 9285112
>seq9943
Length=499256
Score = 96.9 bits (106), Expect = 4e-15
Identities = 94/121 (78%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742
|||||||||| || || | ||||||||| || || ||||||||||| ||||| || || |
Sbjct 292078 CCTCGTCTCTGCTGATGAGTTCGTTGGAGAAGGTCAGTCCGGGCATCAGGCCTCGTTTCT 292019
Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802
| ||||| || |||| || || |||||||| ||||| || || || || || || || |
Sbjct 292018 TGAGCCAGAAAATGGCGGCGAAGGATCCAGAGAAGAAGATCCCCTCGACAGCGGCGAACG 291959
Query 32803 C 32803
|
Sbjct 291958 C 291958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633500362952000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |