Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq12570 107 2e-18 >seq12570 Length=3236859 Score = 107 bits (118), Expect = 2e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 || || | ||| || |||| || | |||||||||||| || ||||| ||||||| |||| Sbjct 1218825 TGGGCGATCATGTATGTTAGAAGTGCATAGCTGGCAATATTGAAAGGTACTCCCAGACCC 1218884 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368 ||||| || || | |||||| ||||| ||||| ||||| || ||| ||||| || ||| Sbjct 1218885 ATGTCACCAGAGCGCTGATAAAGCTGGCAGGACAGCTCGCCATCACACACATAGAACTGA 1218944 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGC 20412 || | ||| || || || || ||||| | | |||||| || Sbjct 1218945 CAAAGAGCGTGGCATGGAGGCAGAGCCATAAGTGGCAAGTCTGC 1218988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441281104800800