Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 98.7 1e-15
>seq9898
Length=4754808
Score = 98.7 bits (108), Expect = 1e-15
Identities = 343/526 (65%), Gaps = 16/526 (3%)
Strand=Plus/Plus
Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140
|| || ||||| | || || ||||| || || ||||| |||| | ||||||| |||||
Sbjct 100189 GGAACAAATGGTAATTCAAATGGCCTTGTGCCAATGCTGAGGGTGTACAACAACACGGCG 100248
Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200
|||||||||||||| ||||| | | ||| | || || | || || |||||
Sbjct 100249 CGCTACGTGGACCAAGGTGGCAATAAACGACCTGGTGCCTTTGCCATGTACCTTGAGCCA 100308
Query 94201 TGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260
|||||| |||||| | ||| | || | |||||| || || || | ||
Sbjct 100309 TGGCACTTTGACGTGTTTGACTTCCTTGAGTTAAAGAAGAACACTGGTAAAGAGGAGCAG 100368
Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320
||||| ||||||||||||| || || ||| | || || | || ||||| | || ||
Sbjct 100369 AGGGCACGAGACCTCTTCTATGCCCTATGGATCCCTGATTTGTTCATGAAGAGGGTGGAA 100428
Query 94321 AAAAACTCCGCCTGGAGTCTTT--TTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTT 94378
|| ||| | ||| |||||| | || |||| ||| || || || ||| || ||
Sbjct 100429 AACAACCAGGACTG--GTCTTTGATGTGCCCCAGTGAGTGCCCTGGGCTGGATGAGTGTT 100486
Query 94379 GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC-CAG-GAA 94436
| || | ||||| | |||| |||| ||||| ||||| ||||| || |||
Sbjct 100487 GGGGGGAGGAGTTTGAGAAGCTGTACACTCGCTACGA---GCAGG--AAGGCAGAGTGAA 100541
Query 94437 ---GGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493
||| | | ||| | || ||||| || ||| | || ||| || || ||
Sbjct 100542 ACGGGTGGTCAAGGCTCAGCAGGTGTGGTATGCCATCATAGAGTCTCAGACTGAAACAGG 100601
Query 94494 TACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552
|| || ||||| |||| ||| || |||| ||| ||| || |||||| | | |
Sbjct 100602 AACTCCTTACATGTTGTACAAAGATGCCTGT-AACAGGAAGAGTAATCAGCAGAATTTGG 100660
Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATAC 94598
| ||||| || || ||||||| |||||||| ||||||||
Sbjct 100661 GCACTATCAAATGCAGTAACTTGTGCACTGAGATTGTGGAGTATAC 100706
Score = 84.2 bits (92), Expect = 2e-11
Identities = 101/135 (75%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 95074 AAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAG 95133
||||| ||||||| ||| ||| | ||||||||||||| || || ||||| || ||
Sbjct 101167 AAACATGGTGTGAGGAACAGCCTGTTGTTGGCCCCCATGCCTACTGCTTCCACAGCACAA 101226
Query 95134 ATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGC-GGGT 95192
|| || |||||||| ||||| ||||| ||| |||| |||| | ||| ||| || | ||
Sbjct 101227 ATACTAGGCAACAATGAGTCCATCGAAGCCTACACCAGCAACATCTAC-ACACGCAGAGT 101285
Query 95193 GCTCGCCGGGGAATT 95207
||| |||| || ||
Sbjct 101286 CCTCTCCGGAGAGTT 101300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494620421255200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |