Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq12469 84.2 2e-11 >seq12469 Length=12488597 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 118161 ATACACTCCGACAGTTTTCCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCC 118220 ||||| | || | || ||| || | || || |||||| ||| ||||| || || ||| Sbjct 10344563 ATACAGTGGGAAATTTCTCCATCTCTGCCTGCTCTTCCTGACTCCTGATAGTAGCCCTCC 10344622 Query 118221 AGTGATTTGGGCATACTGTGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATC 118280 | |||||||| | |||| ||| || || | ||||| || || |||||||| |||||| Sbjct 10344623 ATAGATTTGGGTAGACTGGCATGGATGACGTAGCGCACATCAGGCTTATCGATACCCATC 10344682 Query 118281 CCGAACGCTATCGTCGAACATATCAC 118306 ||||| || || || | ||| || || Sbjct 10344683 CCGAAGGCAATGGTGGCACAGATGAC 10344708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381695469533280