Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 100 3e-16
seq10290 98.7 1e-15
seq11085 82.4 8e-11
>seq9898
Length=4754808
Score = 100 bits (110), Expect = 3e-16
Identities = 427/668 (64%), Gaps = 9/668 (1%)
Strand=Plus/Minus
Query 153075 TTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTC 153134
||||| ||| | | ||| | ||| || || |||||||||||||| || |||| || ||
Sbjct 101267 TTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCTAGTATTTGTGCTGTGGAAGCAGTA 101208
Query 153135 GGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAAC 153194
|||||| |||| ||||| |||| || || || ||| | ||||| | |
Sbjct 101207 GGCATGGGGGCCAACAACAGGCTGTTCCTCACACCATGTTTAGTAATCTTCTCCTTAAGC 101148
Query 153195 GCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCT 153254
|| ||| ||||| ||||| | ||| | | |||||||||||| || | | ||
Sbjct 101147 AGCTTCCAGTCCCAGAGCGCAGTCGGCACCTTCTCCCACATGTCGTATTGCAGAATGCCC 101088
Query 153255 CGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAG 153314
||| | ||| || | | || || ||||| || || | ||||||
Sbjct 101087 TTACTCACTGGAGAACCTGGGTATGTCTCATAAGGCCCGTCTTTTTCTGCTAACTCGCAG 101028
Query 153315 CTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCT 153374
|| ||||| || ||| | |||||||| || || ||| || | || || | |||
Sbjct 101027 CTTGCCTCCAGGGCGGCGTAGTATATTGTCTCAAAGATCTGGATGTTCAGCAGCTGGGCT 100968
Query 153375 TCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCG 153434
|| || || | || |||| || | ||||| || || |||||||| | ||
Sbjct 100967 TCAGGACTTTCAAATGGATAACGCATGAGAATGAAGGCATCTGCGAGACCCTGCACTCCA 100908
Query 153435 ACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTC-GCTATGGGATAGTGATT 153493
| ||||| || | || || ||| | | ||| || | | || |||| ||
Sbjct 100907 ATTCCGATTGGCCTGTGGCGCTTGTTCGAGTTC-TCGGCTTCAGGGACTGGGTAGTAGTT 100849
Query 153494 GCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTC 153553
|| || || ||||||||||| | || | |||||||| | | ||| || |
Sbjct 100848 AATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACAGAGGCAAGCTTTTT 100789
Query 153554 GAAATCATAGGTCATTTCGTCGACGCGTACGCATCGAT--TCACGGCAATAGACGCCAGA 153611
||| ||| ||||| ||| | || ||| ||| || | | |||||||| ||||
Sbjct 100788 GAAGTCAAAGGTCCGTTC-TGGA---GTAA-CATACATGTTAAGAGCAATAGAAGCCAAG 100734
Query 153612 TTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTG 153671
||||||||||| ||| || | | |||| ||| ||||| | ||| | ||| |||
Sbjct 100733 TTACAGACGGCTACCTCATCTTTGCTTGTATACTCCACAATCTCAGTGCACAAGTTACTG 100674
Query 153672 CATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGC 153731
||||| || ||||||||| |||||||| || || | || || || |||||| | | |
Sbjct 100673 CATTTGATAGTGCCCAAATTCTGCTGATTACTCTTCCTGTTACAGGCATCTTTGTACAAC 100614
Query 153732 ATGTACGG 153739
||||| ||
Sbjct 100613 ATGTAAGG 100606
>seq10290
Length=4455921
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| || ||||| || | ||| | | | || || || |||||||||||||| |
Sbjct 2171163 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAGTCAGAC 2171104
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||| ||||| || || |||| | | || || | ||| || || || ||
Sbjct 2171103 AGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGATCTGGGGGA 2171044
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| ||| | || | || | | || | ||||||| | | ||||||
Sbjct 2171043 ATGCCTTCCTTGTC-CTGAATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCAC 2170985
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || ||||| || ||||| ||||| ||||||||
Sbjct 2170984 CTCCAAAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2170937
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| || ||||| || | ||| | | | || || || || |||||||||||
Sbjct 2170935 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAG 2170876
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||| || || || |||| | |||| | | ||| || || || ||
Sbjct 2170875 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGA 2170816
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| ||| | || | |||| | ||| | |||||| | | ||||||
Sbjct 2170815 ATGCCTTCCTTGTC-CTGAATCTTGGCCTTAACATTTTCAATCGTGTCGCTGGGCTCCAC 2170757
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | ||||| ||||| || ||||| ||||| ||||||||
Sbjct 2170756 CTCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTCACAAAGATCTGCAT 2170709
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || | || ||||| || | ||| | | | ||||||||||| || |||||||||
Sbjct 2171392 GCCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTTTGGATATTGTAGTCGGA 2171333
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| || ||| || || || || || |||| | |||| | | ||| || || || ||
Sbjct 2171332 GAGGGTGCGCCCATCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGG 2171273
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| ||| || || | | || | |||||| | | ||||||
Sbjct 2171272 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCAC 2171213
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || ||||| || ||||| ||||| ||||||||
Sbjct 2171212 CTCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2171165
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 138399 ACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA 138458
||| | ||| | ||| | | | || || || || ||||||||||| || ||||||
Sbjct 2173299 ACGAAGAACAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGAGTACGGCC 2173240
Query 138459 GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTT 138518
||| ||||| || || || | | |||| | | ||| || || || || || ||||| ||
Sbjct 2173239 GTCTTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTT 2173180
Query 138519 GTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578
||| ||| || || | | || | |||||| | | ||||||||| | || |
Sbjct 2173179 GTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGAT 2173120
Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| || ||||| || ||||| ||||| ||||||||
Sbjct 2173119 GGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2173084
>seq11085
Length=328877
Score = 82.4 bits (90), Expect = 8e-11
Identities = 154/224 (69%), Gaps = 2/224 (1%)
Strand=Plus/Minus
Query 138391 CCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATA 138450
|||| ||||| | || ||||| | | | || ||||| || ||||||||||| |
Sbjct 148065 CCTCTCAAACATAGCACCAAATGGAGGGTGGATTCCTTCTGCATGTTGTAGTCTGAGAGG 148006
Query 138451 GTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATA 138510
||| | ||| || || || ||||| | | | || || | ||| ||||| ||||| |||
Sbjct 148005 GTATGACCGTCTTCAAGCTGCTTACCAGCAAAAATCAGTCTCTGCTGGTCAGGAGGAATA 147946
Query 138511 CCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCG 138570
|||||||| | ||| ||| || | | ||| | |||||| | || |||||||
Sbjct 147945 TCTTCTTTGCCCTGGATCTTTGCCTTAACATTTTCAATGGTGTCACTAGATTCCACCTGC 147886
Query 138571 ACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| ||| | ||||| | ||||| || || ||||| | ||||||
Sbjct 147885 AACGTGA-TGTTTTTTCGGTCAGGGTCTTGACAAAGA-CTGCAT 147844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496159301486400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |