Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 132 5e-26
>seq9898
Length=4754808
Score = 132 bits (146), Expect = 5e-26
Identities = 490/746 (66%), Gaps = 30/746 (4%)
Strand=Plus/Minus
Query 146044 AGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGC-GCCTCAG 146102
||| |||||| |||| |||| || | ||||||||| |||| ||| || | || | |
Sbjct 101333 AGGTCCTTGAGCAGATGTGGGTTTACAATCTGAAACTCTCCGGAGAGGACTCTGCGTGTG 101274
Query 146103 ATACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGT 146162
|| | |||||||||| | | |||| ||||| ||||| || ||||| || || || |
Sbjct 101273 -TAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCTAGTATTTGTGCTGTGGA 101215
Query 146163 AGCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTC 146222
||| ||||||||| |||| || || ||| ||||| || ||| | |||||| ||
Sbjct 101214 AGCAGTAGGCATGGGGGCCAACAACAGGCTGTTCCTCACACCATGTTTAGTAATCTTCTC 101155
Query 146223 CC---GTAGTTTGGACCAATTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTA 146279
| | || || ||| | ||| | | | || || | | | |||||||
Sbjct 101154 CTTAAGCAGCTT---CCAGTCCCAGA---GCGCAGTCGGCACCTTCTCCCACATGTCGTA 101101
Query 146280 ATGCATAGTGCCGCGGA---ACAGGGGGCTATTCTCG-TACGATTCATAAGGACCGTCGA 146335
|||| | |||| | | || || | | || | || | |||||||| |||||
Sbjct 101100 TTGCAGAATGCC-CTTACTCACTGGAG---AACCTGGGTATGTCTCATAAGGCCCGTCTT 101045
Query 146336 TCTTGGCCAGTTCGCAGCTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGT 146395
| | || | |||||||| || ||||| || | ||||||| ||||| |||| |
Sbjct 101044 TTTCTGCTAACTCGCAGCTTGCCTCCAGGGCGGCGTAGTATATTGTCTCAAAGATCTGGA 100985
Query 146396 AGTTGACGCTCCTGGCCTCCTCG-CTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTC 146453
||| | || |||| || | | || || | || ||| || | || | ||||| ||
Sbjct 100984 TGTTCA-GCAGCTGGGCTTCAGGACTTTCAAATGG-ATAACGCATGAGAATGAAGGCATC 100927
Query 146454 GGCGAGACCCTGTATCCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCC 146513
||||||||||| | || | || | || | ||| |||||| |||| | || |
Sbjct 100926 TGCGAGACCCTGCACTCCAATTCCGATTGGCCTGTGGCGCTTGTTCGAGTTCTCGGCTTC 100867
Query 146514 CGC-AGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCG 146572
| | |||| |||| ||| |||| |||||||||||||| || | || | | ||| |
Sbjct 100866 AGGGACTGGG-TAGTAGTTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAG 100808
Query 146573 TCAAACGATTCA-GCAGGACATAGTCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTG 146631
| | | || || || ||||||| || ||| | || || || ||||
Sbjct 100807 TGACA-GAGGCAAGCTTTTTGAAGTCAAAGGTCC--GTTCTGGAGTA-ACATACATGTTA 100752
Query 146632 ACGGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATC 146691
| || ||||| ||||||||||| ||||| ||| || ||| ||||| |||||||
Sbjct 100751 AGAGCAATAGAAGCCAAGTTACAGACGGCTACCTCATCTTTGCTTGTATACTCCACAATC 100692
Query 146692 TCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTG 146751
|| | ||| | ||| ||||| ||||| |||||||||| | || ||||| | ||||
Sbjct 100691 TCAGTGCACAAGTTACTGCATTTGATAGTGCCCAAATTCTGCTGATTACTCTTCCTGTTA 100632
Query 146752 CAGGGGTCCTTGTAGAGCATGTACGG 146777
|||| || ||||| | |||||| ||
Sbjct 100631 CAGGCATCTTTGTACAACATGTAAGG 100606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475402014708800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |