Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq9943 100 3e-16
seq11714 95.1 1e-14
>seq9943
Length=499256
Score = 100 bits (110), Expect = 3e-16
Identities = 102/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598
||||||| | | ||||||||| || |||||| ||| || ||||| || || || ||||
Sbjct 292078 CCTCGTCTCTGCTGATGAGTTCGTTGGAGAAGGTCAGTCCGGGCATCAGGCCTCGTTTCT 292019
Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658
| | ||||||||| || || || |||||||||||||||||||| ||| |||||||
Sbjct 292018 TGAGCCAGAAAATGGCGGCGAAGGATCCAGAGAAGAAGATCCCCTCGACAGCGGCGAACG 291959
Query 127659 CAAATAGACGCTC 127671
| | | ||||||
Sbjct 291958 CCACCACACGCTC 291946
>seq11714
Length=3826745
Score = 95.1 bits (104), Expect = 1e-14
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|| |||||| | ||||| ||||||| | | |||||||| || | ||| ||||| ||||||
Sbjct 1500855 TAAATGTTGCTGGTGTAAGGCTCAATGGATTCATTGTTGCCAAGGATCTGGGCAGTGGAG 1500914
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994
||||||||||| || |||| ||| ||||||||
Sbjct 1500915 GCTGTGGGCATAGGGGCCAGGAGGAGGCTGTT 1500946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613379743879200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |