Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 87.8 3e-12
seq11714 86.0 1e-11
>seq9898
Length=4754808
Score = 87.8 bits (96), Expect = 3e-12
Identities = 112/152 (74%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969
||| || ||| || || | ||||||| | || ||||| ||| || || || || |
Sbjct 101668 CCTGCTTCCAGCCATAAAAGTGCATGCTGGTCAATTTGCCATAGTTTGGCTCTGCAATAT 101609
Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028
|||| || ||||||||||| ||||| ||| |||| || || ||||| ||||| ||||
Sbjct 101608 GAATATTTAGAGACTGGCTCTGGTCAATG-TAGGCACCGCGGTCTGCAGCCATCTTGAGT 101550
Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060
|| |||||||| || || ||||| || || ||
Sbjct 101549 ATAGTCTTCTGTGATATTTCCCAAACTGTTTT 101518
>seq11714
Length=3826745
Score = 86.0 bits (94), Expect = 1e-11
Identities = 110/149 (74%), Gaps = 2/149 (1%)
Strand=Plus/Plus
Query 203914 CTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAAT 203973
|| |||||| || | ||||||| | ||||||| ||| || || || ||||||||
Sbjct 1500382 CTTCCACCCATAGAAGTGCATGCTTGTGAGTTTGCCATAGTTTGGTTCAGCAATGTGAAT 1500441
Query 203974 GTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGG 204032
||||||||| ||||| ||||| ||| |||| || || || || ||||| |||| |
Sbjct 1500442 GTTCAGAGATTGGCTCTGGTCAATG-TAGGCACCACGGTCAGCCGCCATCTTGAGGACCA 1500500
Query 204033 TCTTCTGCGAAATCTCCCACACCGTCTTG 204061
| ||||| || || |||||||| || |||
Sbjct 1500501 TTTTCTGAGAGATTTCCCACACAGTTTTG 1500529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 794990006507200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |