Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq10290 154 2e-32
>seq10290
Length=4455921
Score = 154 bits (170), Expect = 2e-32
Identities = 177/238 (74%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 46356 TATATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATAT 46415
|| |||| | ||| || || | ||||| || ||||| | || ||||||||||||||
Sbjct 2171402 TAAATTACTGGCCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTTTGGATAT 2171343
Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475
|||||||||| || |||||| | || || |||||||||||||| || ||||| | |||||
Sbjct 2171342 TGTAGTCGGAGAGGGTGCGCCCATCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCT 2171283
Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGC 46535
| || | || | || ||||||||| |||||| ||| | || | | ||||| |
Sbjct 2171282 GATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCAC 2171223
Query 46536 TCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| | ||||| |||| |||||||| || || || || ||||| |||||||| |||||
Sbjct 2171222 TGGGCTCCACCTCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2171165
Score = 132 bits (146), Expect = 5e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | ||||| || ||||| | || || || ||||| |||||||| ||
Sbjct 2170935 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAG 2170876
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || || |||||||||||||| || ||||| | |||||| || | ||
Sbjct 2170875 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGA 2170816
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || ||||||||| ||||| ||| | | | | ||||||||| | |||||
Sbjct 2170815 ATGCCTTCCTTGTCCTGAATCTTGGCCTTAACATTTTCAATCGTGTCGCTGGGCTCCACC 2170756
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|| | |||||||||||||| || || ||||| |||||||| ||||| |||
Sbjct 2170755 TCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTCACAAAGATCTGCATATTG 2170705
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | ||||| || ||||| | || || || || || |||||||| ||
Sbjct 2171163 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAGTCAGAC 2171104
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|||||||| |||| ||||||||||||||||| || |||| | |||||| || | ||
Sbjct 2171103 AGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGATCTGGGGGA 2171044
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || ||||||||| ||||| ||| | || | | |||||||| | |||||
Sbjct 2171043 ATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACC 2170984
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| |||||||| || || || || ||||| |||||||| |||||
Sbjct 2170983 TCCAAAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2170937
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
|| || ||||| |||||||| || ||||| || |||| ||||||||||| || || ||
Sbjct 2173274 TCTTTCTGGATGTTGTAGTCAGACAGAGTACGGCCGTCTTCGAGCTGCTTTCCAGCAAAG 2173215
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
||||| | |||||| || | || | || ||||||||| |||||| ||| | ||
Sbjct 2173214 ATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTC 2173155
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||| || | ||||| |||| |||||||| || || || || ||||| |||
Sbjct 2173154 TCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACA 2173095
Query 46583 AAGATTTGCAT 46593
||||| |||||
Sbjct 2173094 AAGATCTGCAT 2173084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565120971722400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |