Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq10289 172 2e-37
seq10290 95.1 5e-14
seq8916 91.5 6e-13
>seq10289
Length=12717785
Score = 172 bits (190), Expect = 2e-37
Identities = 287/414 (69%), Gaps = 3/414 (1%)
Strand=Plus/Plus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
|| |||||| | | ||||| | || |||||||| || || | || ||| ||||||
Sbjct 4422894 GGCAAGCCCAAAGTACAAGTGGAGTACAAAGGTGAGACAAAGGCGTTCTATCCAGAAGAA 4422953
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || || |||||| | ||| ||||| |||| ||||| ||| | || |
Sbjct 4422954 ATCTCGTCAATGGTTTTGGTTAAGATGAAGGAAATTGCAGAGGCGTATTTGGGGCAAAGA 4423013
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|| | ||||||| || || || || |||||||||||||| | || || ||||| ||
Sbjct 4423014 GTGTCCAATGCAGTCATCACAGTCCCTGCTTATTTCAATGACTCCCAGCGCCAAGCCACA 4423073
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|||||||||||| |||| ||||||| ||||| || |||| || |||||||| || |||
Sbjct 4423074 AAAGATGCAGGAGTTATTTCTGGTTTGAATGTCCTGAGAATCATCAATGAACCAACTGCA 4423133
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492
|| ||| | |||||||| |||| || || ||| || || |||| || | |
Sbjct 4423134 GCAGCTATTGCATATGGTCTAGACAAGGGAA---AAAGAGGGGAGCGAAATGTTCTCATC 4423190
Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552
|||||| | ||||| || ||| ||| || | || ||||||||||||| | |||
Sbjct 4423191 TTTGATCTGGGTGGTGGCACTTTTGACGTATCCATTCTGACAATTGAAGATGGCATTTTT 4423250
Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606
|| || || || || ||| || || || | || || ||||| |||| |||
Sbjct 4423251 GAGGTGAAAGCCACAGCTGGAGACACACACTTGGGTGGAGAAGACTTTGACAAT 4423304
>seq10290
Length=4455921
Score = 95.1 bits (104), Expect = 5e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106
|| ||| | || || || || || || || || ||||||||||| ||||| ||||| |
Sbjct 2172853 ATCATGCAAATCTTTGTCAAGACCCTCACCGGCAAAACTATTACCCTTGAGGTTGAGCCC 2172912
Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166
||| | ||||||| | ||| || ||||| || |||||||| ||||| || |||
Sbjct 2172913 AGTGACACCATTGAAAACGTGAAAGCTAAGATTCAGGACAAGGAAGGCATTCCCCCAGAT 2172972
Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226
|||||| | | ||||| | || || || ||||| ||||| | || | | || ||
Sbjct 2172973 CAACAAAGGCTTATTTTTGCTGGCAAGCAGCTTGAGGATGGGCGTACCCTCTCCGACTAC 2173032
Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGT 391258
|| || | || || | || |||||||||||
Sbjct 2173033 AACATCCAGAAAGAATCCACTCTTCACTTAGT 2173064
>seq8916
Length=5461894
Score = 91.5 bits (100), Expect = 6e-13
Identities = 98/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 451474 AGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTC 451533
||| || |||||| | || |||||||| ||||| || || ||| ||| | || |
Sbjct 3649267 AGAGAAGAATATTCTTGTGTTTGATTTGGGTGGTGGCACATTTGACGTCTCTCTTCTGAC 3649208
Query 451534 AATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGA 451593
||||| |||| ||||||||||| ||||||||||| ||||| ||||||||||| ||
Sbjct 3649207 CATTGACAATGGTGTATTTGAAGTGGTCGCAACCAATGGGGATACCCATCTAGGAGGAGA 3649148
Query 451594 AGATATTGAT 451603
|||| | |||
Sbjct 3649147 AGATTTCGAT 3649138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975297683114960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |