Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 208 9e-49
seq9943 98.7 1e-15
seq11381 86.0 8e-12
>seq9898
Length=4754808
Score = 208 bits (230), Expect = 9e-49
Identities = 936/1451 (65%), Gaps = 54/1451 (4%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|||||| ||||| ||||| | || || | || ||||| ||||||||| | |
Sbjct 99898 CCACAGCACATGCTCATGAGAGTAGCTGTTGGAATCCACAAAACTGATATTGATGCAGCC 99957
Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730
| ||||| ||| || | |||| | || ||||| || || | || || || ||
Sbjct 99958 ATTGAGACCTACAACCTGCTGTCTGAGAAGTG-GTTCACTCATGCCTCTCCCACTCTGTT 100016
Query 111731 CAACGCTGGTACACCAA--GACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788
||| || || |||||| |||| || | || ||||| ||||| | || | |||||
Sbjct 100017 CAATGCAGG--CACCAACAGACCACAGCTCTCTAGTTGCTTCCTGCTGGCCATGAAGGAT 100074
Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848
|| || |||||||||| | || |||| |||| || | ||||| || | ||
Sbjct 100075 GACAGCATTGATGGCATTTATGATACACTCAAACAATGCGCTCTCATCTCCAAATCTGCA 100134
Query 111849 GGTGGTATCGGGAT-GCACATCCATGATGTCAGAGCCAACAAGTCTCGT-ATTAGAGGTA 111906
|| || || || | ||| | || | ||| | |||| | | ||| || |
Sbjct 100135 GGAGGGATTGGTGTAGCAGTTAGCTGCATT-AGATC-AACAGGAAGCTACATTGCTGGAA 100192
Query 111907 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 111966
|||||||| | ||| |||| || | |||||||| | || | ||| ||| |||||||
Sbjct 100193 CAAATGGTAATTCAAATGGCCTTGTGCCAATGCTGAGGGTGTACAACAACACGGCGCGCT 100252
Query 111967 ATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023
| || |||||| ||| | || || | | || | || |||||||||||||
Sbjct 100253 ACGTGGACCAAGGTGGCAATAAACGACCTGGTGCCTTTGCCATGTACCTTGAGCCATGGC 100312
Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083
|| || | | || ||||||||||| ||| ||| | |||||| | ||
Sbjct 100313 ACTTTGACGTGTTTGACTTCCTTGAGTTAAAGAAGAACACTGGTAAAGAGGAGCAGAGGG 100372
Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143
|| || ||||||| || || ||||| || ||| | ||||||||||| || || | |
Sbjct 100373 CACGAGACCTCTTCTATGCCCTATGGATCCCTGATTTGTTCATGAAGAGGGTGGAAAACA 100432
Query 112144 GTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCCGGTCTCTCCGA-TGCCGTGGG 112201
| |||||| | | || || || | || || || || || || | |||
Sbjct 100433 ACCAGGACTGGTCTTTGATGTGCCCCAGTGAGTGC-CCTGGGCTGGATGAGTGTTGGGGG 100491
Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGT 112261
||||||||||| || ||||| |||||| | ||| || || || ||||
Sbjct 100492 -GAGGAGTTTGAGAAGCTGTACACTCGCTACGAGCAGGAA----GGCAGAGTGAAACGGG 100546
Query 112262 --GCCA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317
| || ||| | |||||| | || || | ||||||| || || || || || |
Sbjct 100547 TGGTCAAGGCTCAGCAGGTGTGGTATGCCATCATAGAGTCTCAGACTGAAACAGGAACTC 100606
Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377
| || ||| | |||||||| ||||||||| ||||||||||| |||||||||| |
Sbjct 100607 CTTACATGTTGTACAAAGATGCCTGTAACAGGAAGAGTAATCAGCAGAATTTGGGCACTA 100666
Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437
|||| | ||| | || || || || |||| | |||| |||||||||| || |
Sbjct 100667 TCAAATGCAGTAACTTGTGCACTGAGATTGTGGAGTATACAAGCAAAGATGAGGTAGCCG 100726
Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTG 112497
| |||||| | || || || ||||| || |||||| |||||| | ||| ||||
Sbjct 100727 TCTGTAACTTGGCTTCTATTGCTCTTAACATGTATGTTACTCCAGA---ACGGACCTTTG 100783
Query 112498 ATTATGAAAAACTCCACGAAGTTACGAAA---ACTGTCACAAAAAACCTAAACAGAGTTA 112554
| | |||| || | || || ||| | ||| || |||||| |||| | |
Sbjct 100784 ACTTCAAAAAGCTTGCCTCTGTCACTAAAGTAATTGT---AAGAAACCTCAACAAGATCA 100840
Query 112555 TTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611
|||| | || | ||||| || ||| | | || || || | | | ||| | |
Sbjct 100841 TTGACATTAACTACTACCCAGTCCCTGAAGCCGAG---AACTCGAACAAGCGCCACAGGC 100897
Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTG 112671
|||| || | || || || |||||||| |||| |||||||| || | ||||||
Sbjct 100898 CAATCGGAATTGGAGTGCAGGGTCTCGCAGATGCCTTCATTCTCATGCGTTATCCATTTG 100957
Query 112672 AT--TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGC 112729
| ||| ||||| || | || | || ||||||||||| || |||||||
Sbjct 100958 AAAGTCCT--GAAGCCCAGCTGCTGAACATCCAGATCTTTGAGACAATATACTACGCCGC 101015
Query 112730 TCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789
|| ||||| || | ||||| ||||| || || || ||||| || | |||||
Sbjct 101016 CCTGGAGGCAAGCTGCGAGTTAGCAGAAAAAGACGGGCCTTATGAGACATACCCAGGTTC 101075
Query 112790 TCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGG--GAAGGTG-AGACCAAGCTTC 112845
||||| | ||||| | || |||| || |||||| ||||||| ||| |||
Sbjct 101076 TCCAG-TGAGTAAGGGCATTCTGCAATACGACATGTGGGAGAAGGTGCCGACTGCGCT-- 101132
Query 112846 ACTACGACTGGGACGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 112904
|| |||| ||| ||| || ||||| || | | | ||| | | ||||| ||
Sbjct 101133 -CTGGGACT-GGAAGCTGCTTAAGGAGAAGATTACTAAACATGGTGTGAGGAACAGCCTG 101190
Query 112905 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 112964
||| |||| || ||||| || || ||||| |||||||| | || || ||||| | | |
Sbjct 101191 TTGTTGGCCCCCATGCCTACTGCTTCCACAGCACAAATACTAGGCAACAATGAGTCCATC 101250
Query 112965 GAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTC 113024
||| ||||||| | |||||||| | ||| |||| | ||||||||| ||||||
Sbjct 101251 GAAGCCTACACCAGCAACATCTACACACGCAGAGTCCTCTCCGGAGAGTTTCAGATTGTA 101310
Query 113025 AACAAGCATCT 113035
||| |||||
Sbjct 101311 AACCCACATCT 101321
>seq9943
Length=499256
Score = 98.7 bits (108), Expect = 1e-15
Identities = 90/114 (79%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 102203 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 102262
||| ||||| |||||||||||||| |||||| ||| |||| ||||||||||| |||||
Sbjct 291969 TGTCGAGGGGATCTTCTTCTCTGGATCCTTCGCCGCCATTTTCTGGCTCAAGAAACGAGG 292028
Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACT 102316
|| ||||| || || |||||||||||| || ||| | ||||||| |||
Sbjct 292029 CCTGATGCCCGGACTGACCTTCTCCAACGAACTCATCAGCAGAGACGAGGTACT 292082
>seq11381
Length=12543884
Score = 86.0 bits (94), Expect = 8e-12
Identities = 88/110 (80%), Gaps = 4/110 (4%)
Strand=Plus/Plus
Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCT 102250
|||||||| ||| ||||| || ||||||||||| ||||| ||| || |||||||||||
Sbjct 9286870 GCATTTGCAGCTGTAGAGGGAATTTTCTTCTCTGGATCCTT-TGCGGCCATTTATTGGCT 9286928
Query 102251 CAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT-CTCCAACGAGCTTATC 102299
|| ||| | ||||| ||||| ||||| | ||| ||||| || ||||||
Sbjct 9286929 GAAAAAGAGGGGTCTAATGCCCGGTCT-TACTTATTCCAATGAACTTATC 9286977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620613440766400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |