Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq11714 98.7 1e-15
seq11381 82.4 9e-11
>seq11714
Length=3826745
Score = 98.7 bits (108), Expect = 1e-15
Identities = 109/144 (76%), Gaps = 6/144 (4%)
Strand=Plus/Plus
Query 106504 TGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTC---TTAATCGTCCCCAAATTCTT 106560
|||||| |||| ||| || || |||| ||| ||| || || || || |||||||
Sbjct 1502033 TGTGTATTCTACAATCTCAGTGCACAGGTT---ACTGGATTTGATGGTGCCTAAATTCTG 1502089
Query 106561 TTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGT 106620
||||||||||| | || || ||||| |||||||||||||| || ||||| ||||| ||
Sbjct 1502090 CTGGTTACTCTTCCTATTACATGCATCTTTGTAGAGCATGTACGGTGTCCCTGTCTCTGT 1502149
Query 106621 CTGTGACTTGAGAATTGCCTTCCA 106644
|||||||| | ||| || | |||
Sbjct 1502150 CTGTGACTCAATAATGGCATACCA 1502173
>seq11381
Length=12543884
Score = 82.4 bits (90), Expect = 9e-11
Identities = 95/123 (77%), Gaps = 4/123 (3%)
Strand=Plus/Minus
Query 117293 CCTCATCTCGGGAAATAAGTTCATTTG-AGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351
||||||||| | ||||||||||| | | ||| | || || ||||| ||||||| |||
Sbjct 9286990 CCTCATCTCTGCTGATAAGTTCATTGGAATAAGTA-AGACCGGGCATTAGACCCCTCTTT 9286932
Query 117352 TTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 117410
|||| ||||||||| | |||| || || || |||||||| || ||||| ||| |||||
Sbjct 9286931 TTCAGCCAATAAATGGCCGCA-AAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAA 9286873
Query 117411 CGC 117413
||
Sbjct 9286872 TGC 9286870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589858231488800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |