Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq10290 145 2e-29
seq11085 93.3 9e-14
>seq10290
Length=4455921
Score = 145 bits (160), Expect = 2e-29
Identities = 168/225 (75%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | || || | |||||||||||| ||||| || || ||||| |||| || ||
Sbjct 2173077 TCTGAGGCGCAGGACTAAGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGT 2173018
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||| || |||||||| || || || ||||| | |||||| ||||| ||||||||
Sbjct 2173017 ACGCCCATCCTCAAGCTGCTTGCCAGCAAAAATAAGCCTTTGTTGATCTGGGGGAATGCC 2172958
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
||| ||||| ||||| || || ||||| ||||||||||| ||| || || ||
Sbjct 2172957 TTCCTTGTCCTGAATCTTAGCTTTCACGTTTTCAATGGTGTC---ACTGGGCTCAACCTC 2172901
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||||||| || || || || | || || || || | ||||||
Sbjct 2172900 AAGGGTAATAGTTTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 2172856
Score = 131 bits (144), Expect = 4e-25
Identities = 157/212 (74%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| || || |||||||| ||||| |||||||| |||| || || | |||||||||
Sbjct 2171373 ACAAGATGGAGGGTGGACTCCTTTTGGATATTGTAGTCGGAGAGGGTGCGCCCATCTTCA 2171314
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| | | || || ||||| ||||||||||| ||||| ||
Sbjct 2171313 AGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGG 2171254
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||| |||||||| |||||||| ||| ||||| || || || | |||
Sbjct 2171253 ATCTTGGCCTTCACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGAGTGATGGTC 2171197
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || | ||||| || || | |||||
Sbjct 2171196 TTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2171165
Score = 125 bits (138), Expect = 2e-23
Identities = 163/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979
||||| | | |||||| ||||| ||||| ||||| || || ||||| || | |||||
Sbjct 2173304 CTGAGACGAAGAACAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGAGTA 2173245
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| || |||||||||||||| || || ||||| | | || || ||||| |||||||||
Sbjct 2173244 CGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCT 2173185
Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCA 195096
|| ||||| || || || ||| |||||||| |||||||| ||| ||||| ||
Sbjct 2173184 TCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 2173128
Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||||| || || | ||||| || || | |||||
Sbjct 2173127 AGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2173084
Score = 122 bits (134), Expect = 2e-22
Identities = 124/162 (77%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || | || ||||| || || ||||| ||||| ||||| ||||| || | |||||
Sbjct 2171158 TCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAGTCAGACAGAGT 2171099
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| || |||||||||||||| || || || || || | || || ||||| ||||||||
Sbjct 2171098 GCGGCCGTCTTCGAGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGATCTGGGGGAATGCC 2171039
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTC 195080
||| ||||| ||||| || ||| || ||||||||||||||
Sbjct 2171038 TTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATGGTGTC 2170997
Score = 107 bits (118), Expect = 4e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || | || ||||| || || ||||| ||||| || || ||||| || | || ||
Sbjct 2170930 TCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGT 2170871
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||| || |||||||| || || ||||| | | || || ||||| ||||||||
Sbjct 2170870 GCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCC 2170811
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||| ||||| || ||| || || ||||| ||||| ||||| |||||
Sbjct 2170810 TTCCTTGTCCTGAATCTTGGCCTTAACATTTTCAATCGTGTCGCTGGGCTCCACCTCAAG 2170751
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | || || || || | ||||| || || | |||||
Sbjct 2170750 GGTGATGGTTTTGCCAGTGAGGGTTTTCACAAAGATCTGCAT 2170709
>seq11085
Length=328877
Score = 93.3 bits (102), Expect = 9e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || ||||| || || || || ||||| || | || || || ||||| ||||||
Sbjct 148044 TGGAGGGTGGATTCCTTCTGCATGTTGTAGTCTGAGAGGGTATGACCGTCTTCAAGCTGC 147985
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| || || || |||| || ||||| |||||||| |||||||| | || || |||
Sbjct 147984 TTACCAGCAAAAATCAGTCTCTGCTGGTCAGGAGGAATATCTTCTTTGCCCTGGATCTTT 147925
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||| || || ||||||||||| | |||||| | | || | || ||| | |||
Sbjct 147924 GCCTTAACATTTTCAATGGTGTCACTAGATTCCACCTGCAACGTGA-TGTTTTTTCGGTC 147866
Query 195118 AAAGTTTTTACGAACACTTGCATTT 195142
| || || || || || |||||||
Sbjct 147865 AGGGTCTTGACAAAGAC-TGCATTT 147842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109245342827540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |