Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq10289 161 8e-34
seq13501 123 2e-22
seq10290 102 7e-16
seq8916 93.3 3e-13
>seq10289
Length=12717785
Score = 161 bits (178), Expect = 8e-34
Identities = 383/573 (67%), Gaps = 18/573 (3%)
Strand=Plus/Plus
Query 550010 GGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAAT 550069
|||||||| || || || || |||| || |||| ||||| || || || ||||||
Sbjct 4422633 GGAACCACCTACTCCTGCGTGGGCGTTTTCCAGCATGGCAAAGTGGAGATCATCGCCAAT 4422692
Query 550070 GATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTT 550129
|| || || ||| | || || || ||| ||| | ||||| || || || || ||
Sbjct 4422693 GACCAGGGCAACCGCACCACCCCCAGTTACGTTGCCTTCACTGACACCGAGAGGCTAATT 4422752
Query 550130 GGTGATGCAGCAAAATATCAAG---CCACTGGTAATCCTACCAATACTATTTTTGATGCT 550186
||||| || || ||| | || | ||| || || || | || || || ||||||||
Sbjct 4422753 GGTGACGCTGCTAAAAACCAGGTGGCCA-TG--AACCCGGCTAACACCATCTTTGATGCC 4422809
Query 550187 AAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGG 550246
|| | | || || |||| ||| |||| | | ||| ||||| || ||||||| ||||
Sbjct 4422810 AAGAGACTCATCGGGAGAAAATTTGATGACCCTATTGTGCAGGCTGACATGAAGCTTTGG 4422869
Query 550247 CCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGGATCT 550306
|||||| || | | | || ||| || || | | ||| | ||||
Sbjct 4422870 CCTTTCAAAGTGATCAGTGACAGTGGCAAGCCCAAAGTACAAGTGGAGTACAAAGG---- 4422925
Query 550307 GTTAAACAA-----TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAAC 550361
| | |||| || | |||||| |||| || || |||||||| | || |||||
Sbjct 4422926 -TGAGACAAAGGCGTTCTATCCAGAAGAAATCTCGTCAATGGTTTTGGTTAAGATGAAGG 4422984
Query 550362 AAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCAT 550421
||| || || | | | || ||| ||| | ||||||| || || || || || |
Sbjct 4422985 AAATTGCAGAGGCGTATTTGGGGCAAAGAGTGTCCAATGCAGTCATCACAGTCCCTGCTT 4423044
Query 550422 ATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATG 550481
|||| |||||||| || || ||||| || |||||||| ||| |||| |||| | ||||
Sbjct 4423045 ATTTCAATGACTCCCAGCGCCAAGCCACAAAAGATGCAGGAGTTATTTCTGGTTTGAATG 4423104
Query 550482 TTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA-ACAT 550540
| || | || ||||||||||| ||||| || || |||||||||| || || || |
Sbjct 4423105 TCCTGAGAATCATCAATGAACCAACTGCAGCAGCTATTGCATATGGTCTAGACAAGGGAA 4423164
Query 550541 AATGATCAAGAACTTAATGTACTCATCTTTGAT 550573
|| || || | ||||| ||||||||||||
Sbjct 4423165 AAAGA-GGGGAGCGAAATGTTCTCATCTTTGAT 4423196
Score = 154 bits (170), Expect = 1e-31
Identities = 443/679 (65%), Gaps = 2/679 (0%)
Strand=Plus/Plus
Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972
|| ||||| ||| | ||||| | |||| ||||| | || ||| | | || ||| |
Sbjct 4423392 ACAGCTTGTGAACGCGCCAAGAGGACTCTATCATCCAGCACCCAAGCAAGCATCGAAATT 4423451
Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032
|| || ||| |||||||||||| | | | || | || | | ||| |||||||||
Sbjct 4423452 GACTCTCTATATGAGGGAATTGACTTTTACACCTCAATCACTCGAGCCCGATTTGAAGAA 4423511
Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092
| || || ||||| || ||| | || || || || ||| |||| |||| |
Sbjct 4423512 CTAAACTCAGACCTCTTCAGGGGCACACTAGACCCTGTTGAGAAAGCTTTACAAGATGCC 4423571
Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152
||| | || |||||||| | | || ||||| || || || ||||| |||||||||||
Sbjct 4423572 AAGCTGGACAAATCCAAGATCAACGACATTGTCCTGGTGGGCGGATCCACAAGAATTCCC 4423631
Query 552153 AAAATTCGCGAAATG-TTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAA 552211
||||| | || || | || ||| ||| ||||| | | || || |||| | ||
Sbjct 4423632 AAAATCCAAAAACTGCTGCAGGACTTCTTT-AATGGAAGGGACTTGAACAAAAGCATCAA 4423690
Query 552212 TCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAAC 552271
|| ||||| || || |||||||| || || | || || ||||| || || | ||
Sbjct 4423691 CCCGGATGAAGCCGTGGCCTATGGAGCTGCGGTCCAGGCTGCTATCCTGATGGGGGACAC 4423750
Query 552272 TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGA 552331
||| || | || | | | || | |||||| |||| || ||| | || | ||
Sbjct 4423751 CTCTGAGAATGTCCAGGACCTCCTTCTGCTTGATGTTGCTCCACTGTCTTTGGGCATTGA 4423810
Query 552332 AACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAA 552391
|||| || || | ||||| || ||| | | || || || || || ||| |
Sbjct 4423811 GACAGCAGGTGGAGTAATGACCGCACTGATCAAACGTAACACCACAATCCCCACCAAACA 4423870
Query 552392 ATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGA 552451
| | | | || || ||||| || |||||||| | | || || || | |||||
Sbjct 4423871 AACCCAGATCTTCTCCACGTACTCCGATAATCAGCCGGGAGTGCTCATCCAGGTCTTTGA 4423930
Query 552452 AGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTAT 552511
||| ||||| | |||||||| ||||| | ||||| | ||| | | ||| ||
Sbjct 4423931 AGGTGAAAGGGCCATGACTAAAGACAATAACCTCCTTGGCAAGTTTGACCTGACAGGGAT 4423990
Query 552512 TCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGG 552571
|| || || || | ||||| || || ||||| || || || || ||||| || |||||
Sbjct 4423991 CCCACCAGCCCCAAGAGGAGTCCCACAGATTGAGGTAACATTTGACATCGACGCTAATGG 4424050
Query 552572 AATTTTGAATGTGACTGCT 552590
||| | |||||| |||||
Sbjct 4424051 CATTCTCAATGTGTCTGCT 4424069
>seq13501
Length=12216461
Score = 123 bits (136), Expect = 2e-22
Identities = 109/135 (81%), Gaps = 1/135 (1%)
Strand=Plus/Plus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
||||||| ||||||| || || || || |||||||| || || || || || |||||||
Sbjct 9383478 ATGCAGTTGTAACTGTCCCTGCCTACTTCAATGACTCCCAGCGCCAGGCGACCAAAGATG 9383537
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
||||| ||||||||| |||||||| || ||||||||||||||||| || || || ||
Sbjct 9383538 CTGGAGCTATTGCTGGGCTTAATGTGCTGCGTATTATCAATGAACCAACGGCAGCAGCCA 9383597
Query 550518 TTGCATATGGACTTG 550532
|||| ||||| ||||
Sbjct 9383598 TTGCCTATGG-CTTG 9383611
>seq10290
Length=4455921
Score = 102 bits (112), Expect = 7e-16
Identities = 158/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313
|| ||||| || |||||||| ||||| |||||| ||| ||||| |||| |||||
Sbjct 2171157 CTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAGTCAGACAGAGTG 2171098
Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373
| ||||| || || || ||||||||||| || || |||||||| || ||||| |||
Sbjct 2171097 CGGCCGTCTTCGAGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGATCTGGGGGAATGCCT 2171038
Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432
|| || || ||||| || || || |||||| || || || | | || || |
Sbjct 2171037 TCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATGGTGTCGCTG-GGCTCCACCTCCAA 2170979
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
||| | || || ||||| || ||||| || || || ||||||
Sbjct 2170978 AGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCATA 2170936
Score = 100 bits (110), Expect = 2e-15
Identities = 158/224 (71%), Gaps = 2/224 (1%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312
||||||||| || |||||||||||||| |||||| || ||||| |||| |||||
Sbjct 2173305 CCTGAGACGAAGAACAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGAGT 2173246
Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372
| ||||| || || ||||| ||||| || | || |||||||| || ||||| ||
Sbjct 2173245 ACGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCC 2173186
Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGA 563431
||| || || || || || || || ||| || || ||| || | | || || |
Sbjct 2173185 TTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG-GGCTCCACCTCCA 2173127
Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|||| | || || ||||| || ||||| || || || ||||||
Sbjct 2173126 GAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCATA 2173083
Score = 93.3 bits (102), Expect = 3e-13
Identities = 153/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313
||||| || || || | ||||| || |||||| || ||||| || | || ||
Sbjct 2173076 CTGAGGCGCAGGACTAAGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTA 2173017
Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373
| ||| ||||| || || || ||||||||||| ||||| ||||| || ||||| |||
Sbjct 2173016 CGCCCATCCTCAAGCTGCTTGCCAGCAAAAATAAGCCTTTGTTGATCTGGGGGAATGCCT 2172957
Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433
|| || || ||||| || ||| || ||||| || ||| || | | || ||
Sbjct 2172956 TCCTTGTCCTGAATCTTAGCTTTCACGTTTTCAATGGTGTCACTGGGCTCAACCTCAAGG 2172897
Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|||| |||||| || || || || || || || ||||||||
Sbjct 2172896 GTAATAGTTTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 2172856
>seq8916
Length=5461894
Score = 93.3 bits (102), Expect = 3e-13
Identities = 117/160 (73%), Gaps = 3/160 (2%)
Strand=Plus/Minus
Query 552465 TTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCT 552524
|| || ||||| || ||| || ||||| || | || || ||||||||||| |||
Sbjct 3648255 TTGACAAAAGACAACCATCTGCTGGGTACCTTCGACCTAACTGGCATTCCTCCTGCCCCT 3648196
Query 552525 CGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTG 552584
||||| ||||| ||||| || ||||| || || || |||| |||||| |||||| ||||
Sbjct 3648195 CGTGGTGTACCCCAAATCGAGGTTACCTTTGAAATAGATGTCAATGGCATTTTGCGTGTG 3648136
Query 552585 ACTGCTTGTGATAA---ATCTAGCAACAAGAGTAAAAATA 552621
|||||| || || | ||||||||| ||||| ||
Sbjct 3648135 ACTGCTGAGGACAAGGGCACAGGCAACAAGAATAAAATTA 3648096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4028417059443800
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