Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 221 2e-52
seq1333 203 6e-47
seq2554 185 2e-41
seq12823 163 5e-35
seq16072 141 2e-28
seq11714 102 2e-16
seq9943 102 2e-16
seq6658 98.7 2e-15
>seq9898
Length=4754808
Score = 221 bits (244), Expect = 2e-52
Identities = 1000/1566 (64%), Gaps = 58/1566 (4%)
Strand=Plus/Minus
Query 212858 CATGTCCTCGTTCCAGAGGCCCCTGGTCTC-CAGGCACTTGACCAGGTGAGGGTTGACTA 212916
||| ||||| ||||| || |||| | || |||| ||||| ||| || ||||| || |
Sbjct 101364 CATTTCCTCATTCCACAGTCCCC-GTTCAGTCAGGTCCTTGAGCAGATGTGGGTTTACAA 101306
Query 212917 TCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGC 212976
|||| || || || ||||| || || | ||| | ||| ||||||| ||||||
Sbjct 101305 TCTGAAACTCTCCGGAGAGGACTCTGCGTGTGTAGATGTTGCTGGTGTAGGCTTCGATGG 101246
Query 212977 TCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGAC 213036
||| ||||| || || || ||||| ||| || || |||||||| |||| || || |
Sbjct 101245 ACTCATTGTTGCCTAGTATTTGTGCTGTGGAAGCAGTAGGCATGGGGGCCAACAACAGGC 101186
Query 213037 TGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAG 213096
|||||||||| || || | || | |||| ||||||||| |||
Sbjct 101185 TGTTCCTCACACCATGTTTAGTAATCTTCTCCTTAAGCAGCTTCCAGTCCCAGAGCGCAG 101126
Query 213097 ACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGC 213156
| | ||| || | ||||||||| | |||| ||||| || ||||| ||
Sbjct 101125 TCGGCACCT--TC-------TCCCACATGTCGTATTGCAGAATGCCCTTACTCACTGGAG 101075
Query 213157 TGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGG 213216
|| |||| | || || || | | | || | ||||||| |||| |||||
Sbjct 101074 AACCTGGGTATGTCTCATAAGGCCCGTCTTTTTCTGCTAACTCGCAGCTTGCCTCCAGGG 101015
Query 213217 CAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGAC-GTG 213275
| |||||||| || || ||||| |||| |||| ||| || ||| || |||| |
Sbjct 101014 CGGCGTAGTATATTGTCTCAAAGATCTGGATGTTCAGCAGCTGGGCTTC--AGGACTTTC 100957
Query 213276 AAGGGCATCA-TCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGG 213334
|| | || | |||| | ||| |||| || || ||||| || || || ||||| ||
Sbjct 100956 AAATGGATAACGCATGAGAATGAAGGCATCTGCGAGACCCTGCACTCCAATTCCGATTGG 100897
Query 213335 TCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAG----GGGTAAAAGTTGCAGTCGA 213390
||||| | | ||| || || | | || || | ||||| |||| ||| |
Sbjct 100896 CCTGTGGCGCTTGTTCGAGTT----CTCGGCTTCAGGGACTGGGTAGTAGTTAATGTCAA 100841
Query 213391 TGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGA 213450
|||||||||||||||| | ||||| |||||| ||| || | ||||
Sbjct 100840 TGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACAGAGGCAAG------CTTTTTGA 100787
Query 213451 ACACGTAGCCCCCGTCCTGCACAAAC--TCAGG--CAGGGCGATGCTGGCCAGGTTGCAA 213506
| | || |||| ||| | ||| || | || || || |||| ||| ||
Sbjct 100786 AGTCAAAG-GTCCGTTCTGGAGTAACATACATGTTAAGAGCAATAGAAGCCAAGTTACAG 100728
Query 213507 ACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGG 213566
||||| ||||| | | ||| ||||||| ||||| ||||||| ||| |||||| |
Sbjct 100727 ACGGCTACCTCATCTTTGCTTGTATACTCCACAATCTCAGTGCACAAGTTACTGCATTTG 100668
Query 213567 ATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAG 213626
|| ||||||| ||||| || || ||| ||| | ||| ||||| | ||||||
Sbjct 100667 ATAGTGCCCAAATTCTGCTGATTACTCTTCCTGTTACAGGCATCTTTGTACAACATGTAA 100608
Query 213627 GGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTGA 213684
|| | || || || ||| ||| | | | |||| ||| | | | |||||||
Sbjct 100607 GGAGTTCCTGTTTCAGTCTGAGACTCTATGA--TGGCATACCACACCTGCTGAGCCTTGA 100550
Query 213685 CCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGT 213744
||||||| | || || | | | |||||| | ||| |||| | || || |
Sbjct 100549 CCACCCGTTTCAC-TCTGCCTTCCT--GCTCGTAGCGAGTGTACAGCTTCTCAAACTCCT 100493
Query 213745 GGCCCCAGACCCT-GTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG 213803
||||| || || ||||| || || || ||| ||||| | ||||||| |
Sbjct 100492 CCCCCCA-ACACTCATCCAGCCCAGGGCACTCACTGGGGCACATCAAAGACCAGTCCTGG 100434
Query 213804 TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTG 213863
| | | || |||| |||||||| || |||| ||| || || ||| ||||| |
Sbjct 100433 TTGTTTTCCACCCTCTTCATGAACAAATCAGGGATCCATAGGGCATAGAAGAGGTCTCGT 100374
Query 213864 GTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCG 213923
| |||| ||| || |||| ||| || | || || |||||||| | ||| |
Sbjct 100373 GCCCTCTGCTCCTCTTTACCAGTGTTCTTCTTTAACTCAAGGAAGTCAAACACGTCAAAG 100314
Query 213924 TGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCC---TCTTGCCGCCCTGGTCCACC 213980
||||| ||||| | ||| ||||||||||| || || | | ||||| || ||||||||
Sbjct 100313 TGCCATGGCTCAAGGTACATGGCAAAGGCACCAGGTCGTTTATTGCCACCTTGGTCCACG 100254
Query 213981 AGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTG 214040
| ||| ||||| | | | ||| | || || || || || || | || ||
Sbjct 100253 TAGCGCGCCGTGTTGTTGTACACCCTCAGCATTGGCACAAGGCCATTTGAATTACCATTT 100194
Query 214041 GTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCG 214100
||||| || || || || | | || | | ||| | | | || || || ||
Sbjct 100193 GTTCCAGCAATGTAGCTTCCTGTTGATCTAATGCAGCTAACTGCTACACCAATCCCTCCT 100134
Query 214101 GCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCA 214160
|| | |||||||| | ||||| | | | || || ||||| | |||||||||
Sbjct 100133 GCAGATTTGGAGATGAGAGCGCATTGTTTGAGTGTATCATAAATGCCATCAATGCTGTCA 100074
Query 214161 TCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAA 214220
|| | | | ||||| |||||| || |||||||| || ||| | ||| | |||||
Sbjct 100073 TCCTTCATGGCCAGCAGGAAGCAACTAGAGAGCTGTGGTCTGTTGGTGCCTGCATTGAAC 100014
Query 214221 AGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACT 214280
|| ||||| |||||| | | |||| | ||| || || |||||||||| | | ||
Sbjct 100013 AGAGTGGGAGAGGCATGAGTGAACCACTTCTCAGACAGCAGGTTGTAGGTCTCAATGGCT 99954
Query 214281 GAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTC 214340
| || || |||||||| | ||| ||||| ||||||||||| || | |
Sbjct 99953 GCATCAATATCAGTTTTGTGGATTCCAACAGCTACTCTCATGAGCATGTGCTGTGGACGC 99894
Query 214341 TCTATGGGTCCTTTGGGGCCCTTG------AGCAGGTAGGAGCGCTCCAGAGTCTTGAAC 214394
|| | |||| ||| ||| ||||||||||||||||| || ||||| ||
Sbjct 99893 TC--AGCCACCTT----GCCATTGATTTTCAGCAGGTAGGAGCGCTCTAGGGTCTTAAAG 99840
Query 214395 CCAAAG 214400
||||||
Sbjct 99839 CCAAAG 99834
>seq1333
Length=3002836
Score = 203 bits (224), Expect = 6e-47
Identities = 192/245 (78%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448
|||||||||| || | |||| |||||||| ||||||||| || |||||||||||||
Sbjct 1377770 GCTGACAGCCGCTGCTTACGTGCGTCAGGACCTTCTGTTTGAGCTGAGCCACCTGGTCCC 1377829
Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508
|||| || ||||| || |||||||| || ||||||||| || ||||| || ||||| |
Sbjct 1377830 GCAGCACTGACGCCGTGTTGGACAGCCCCGCGTTGTCACTTTTCAGCACTTTTACTTTTT 1377889
Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568
|||||| ||| || ||||| || || ||||| || ||||||||||| || |||| ||||
Sbjct 1377890 CCTCCAACCGGGCAATGCGCTCGAGCTTGCGTCGCCGGCATTTGGTAGCAGCCAGTCGGT 1377949
Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGACT 241628
||| || ||||| | || || ||||| || |||||| ||||| |||||||| |||
Sbjct 1377950 TCCTCAGCCTCTTCCTCTCGGCTTTGATCCGCTCCTGGGTCTCCAGATCGATCGGGGACA 1378009
Query 241629 TGGGT 241633
| |||
Sbjct 1378010 TTGGT 1378014
>seq2554
Length=1717727
Score = 185 bits (204), Expect = 2e-41
Identities = 183/237 (77%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 241391 TGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGC 241450
|| ||||| || || |||| || ||| | |||||||||||||| ||||| || |||
Sbjct 1068239 TGGCAGCCACTGCTCACGTGCGTCATGACTTTTTGTTTGAGTTGGGCTACCTGCTCGCGC 1068298
Query 241451 AGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCC 241510
|| || ||||| || || |||||||| |||||||| | || || || |||||||| ||
Sbjct 1068299 AGCACAGACGCAGTGTTTGACAGTCCAGCGTTGTCCGTTTTCAGGACTTTCACTTTTTCT 1068358
Query 241511 TCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTC 241570
||||| || || || ||||||||||| || | |||||||||| |||||||| ||||||
Sbjct 1068359 TCCAGACGAGCAATACGTTCCAGTTTTCGTCTCCGGCATTTGGAGGCTGCCAGTCGGTTC 1068418
Query 241571 CGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
| || | ||| || || || |||||||| ||||||| ||||| || || ||||||
Sbjct 1068419 CTCAGACGCTTGCGCTCGGCTTTGATGCGCTCCTGGTTCTCCAAATCAATAGGAGAC 1068475
>seq12823
Length=200414
Score = 163 bits (180), Expect = 5e-35
Identities = 164/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474
|| |||| ||||||||| || |||||||||||||||| ||||||||||| | |||
Sbjct 162487 AGCACCTTCTGTTTGAGCTGCTCCACCTGGTCCCGCAGGACGGACGCGGTGGACGCCAGG 162428
Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534
| | ||| | | ||| || ||||||||| ||||| ||||||| ||| || ||||||
Sbjct 162427 TCCGTGTTCTGACTCTTCAGACTCTTCACTTTGTCCTCGAGCCGCGAGATTCGCTCCAGT 162368
Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594
||||| |||||||| |||| || || | |||||| || || | ||| || || ||||||
Sbjct 162367 TTGCGGCGGCGGCACTTGGACGCGGCGATGCGGTTGCGCAGGCGCTTCCGCTCGGCCTTG 162308
Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
||||| ||||| ||||||||||| || |||
Sbjct 162307 ATGCGCTCCTGAGAGTCCATGTCGATGGGGGAC 162275
>seq16072
Length=2121480
Score = 141 bits (156), Expect = 2e-28
Identities = 167/226 (74%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 241402 GCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGC 241461
|| || ||| | || ||||| ||||||||| || |||||||| || ||||| ||| |||
Sbjct 61825 GCTCACGTGACTCATGACCTTCTGTTTGAGCTGTGCCACCTGCTCGCGCAGGACGCTCGC 61766
Query 241462 GGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGC 241521
||| | ||| | | ||| | | || || ||| ||||| ||||| ||||| |
Sbjct 61765 GGTGGACGCCAGCTCAGTGTTCTGTGTTTTTAGTGTCTTTACTTTGTCCTCGAGCCGTGA 61706
Query 241522 GATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTT 241581
||| || |||||||| || |||||| |||| ||| || | |||||| || || ||||
Sbjct 61705 GATACGCTCCAGTTTACGTTTGCGGCACTTGGAGGCGGCGATGCGGTTGCGCAGCTTCTT 61646
Query 241582 ACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
|| |||||||||||||| ||||||| |||||||| || || |||
Sbjct 61645 CCGCTCCGCCTTGATGCGCTCCTGGTTGTCCATGTCAATGGGCGAC 61600
>seq11714
Length=3826745
Score = 102 bits (112), Expect = 2e-16
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977
||| || || ||||| |||||||| | ||||| ||| ||||| ||||| |||
Sbjct 1500824 CTGAAACTCCCCTGAAAGCACCCTGCGAGTGTAAATGTTGCTGGTGTAAGGCTCAATGGA 1500883
Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037
|| ||||| || || ||||| |||||| |||||||||||| || |||| ||||| ||
Sbjct 1500884 TTCATTGTTGCCAAGGATCTGGGCAGTGGAGGCTGTGGGCATAGGGGCCAGGAGGAGGCT 1500943
Query 213038 GTTCCTCACTCCGTGC 213053
|||||||||||| |||
Sbjct 1500944 GTTCCTCACTCCATGC 1500959
>seq9943
Length=499256
Score = 102 bits (112), Expect = 2e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214
||||| | ||||||||| ||||||||||| || || ||||| | || | | |||
Sbjct 292076 TCGTCTCTGCTGATGAGTTCGTTGGAGAAGGTCAGTCCGGGCATCAGGCCTCGTTTCTTG 292017
Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273
||||||||||| || ||||| || |||||||||||||| ||||| || || ||||||||
Sbjct 292016 AGCCAGAAAATGGCGGCGAAGGATCCAGAGAAGAAGATCCCCTCGACAGCGGCGAACGC 291958
>seq6658
Length=7564740
Score = 98.7 bits (108), Expect = 2e-15
Identities = 90/114 (79%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 38960 CACCAGCTCCCACCTGTTGGCGGAGAAGAGCAGGTGGACTGCGTGGTCGTCCAGCTCCGT 39019
||| || ||||| |||||||| |||||||||||||| || | |||||| |||| || |
Sbjct 4485509 CACTAGTTCCCATCTGTTGGCAGAGAAGAGCAGGTGCACAGTGTGGTCCTCCAAATCACT 4485450
Query 39020 CTTACTCTCCAGGTACGAGCTGATCATCTTTCCGATGGTAGTGGTTCTGTCGGG 39073
|| |||||||||| | ||||||| || ||| ||||| ||||| ||||| ||
Sbjct 4485449 TTTCTTCTCCAGGTAGGCACTGATCAGCTGTCCAATGGTGGTGGTCCTGTCTGG 4485396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931339274060800
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