Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq9943 100 5e-16 >seq9943 Length=499256 Score = 100 bits (110), Expect = 5e-16 Identities = 106/137 (77%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||| || || || ||||| ||||| ||||| ||| || || || || Sbjct 291943 GGGGAGCGTGTGGTGGCGTTCGCCGCTGTCGAGGGGATCTTCTTCTCTGGATCCTTCGCC 292002 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 ||||| |||||||||||| | | | || | |||||||| ||| ||| |||||||| || Sbjct 292003 GCCATTTTCTGGCTCAAG-AAACGAGGCCTGATGCCCGGACTGACCTTCTCCAACGAACT 292061 Query 25992 CATCAGCAGGGACGAGG 26008 ||||||||| ||||||| Sbjct 292062 CATCAGCAGAGACGAGG 292078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928651832492800