Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq11714 102 1e-16 seq11381 82.4 9e-11 >seq11714 Length=3826745 Score = 102 bits (112), Expect = 1e-16 Identities = 134/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 75837 AGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAA 75895 ||||||| |||||||| ||| || || | | | | | ||| | || ||| | | Sbjct 1502214 AGGAGGGGAGAGCCAA-GCGTGTGGTGAAGGCCCAGCAGCTATGGTATGCCATTATTGAG 1502156 Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 |||||||| ||||| || ||||| || ||||| ||||| ||||| ||||| | ||||||| Sbjct 1502155 TCACAGACAGAGACAGGGACACCGTACATGCTCTACAAAGATGCATGTAATAGGAAGAGT 1502096 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| ||||||| || || ||||| | || || ||||| || ||| |||| ||| Sbjct 1502095 AACCAGCAGAATTTAGGCACCATCAAATCCAGTAACCTGTGCACTGAGATTGTAGAATAC 1502036 Query 76016 ACA 76018 ||| Sbjct 1502035 ACA 1502033 >seq11381 Length=12543884 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/123 (77%), Gaps = 4/123 (3%) Strand=Plus/Plus Query 65089 GCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTT 65147 || ||||| ||| ||||| || |||||||| || || || |||| | ||||||||| | Sbjct 9286870 GCATTTGCAGCTGTAGAGGGAATTTTCTTCTCTGGATCCTT-TGCGGCCATTTATTGGCT 9286928 Query 65148 GAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCT-CAAATGAACTTATTTCCCGAGATG 65206 ||| ||| ||||||| ||||| || || | ||| | | ||||||||||| | |||||| Sbjct 9286929 GAAAAAGAGGGGTCTAATGCCCGGTCT-TACTTATTCCAATGAACTTATCAGCAGAGATG 9286987 Query 65207 AGG 65209 ||| Sbjct 9286988 AGG 9286990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596445662665600