Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq10290 100 5e-16 >seq10290 Length=4455921 Score = 100 bits (110), Expect = 5e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||||| || || || ||||| | || | ||||| || || ||||| Sbjct 2170938 ATACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCA 2170879 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | || || |||||||| || || ||||| ||||| || Sbjct 2170878 GAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGG 2170819 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || || || |||| || | |||| ||| || ||| | ||| Sbjct 2170818 GGAATGCCTTCCTTGTCCTGAATCTTGGCCTTAACATTTTCAATCGTGTCGCTGGGCTCC 2170759 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || || || ||||| || || || ||||| ||||| || ||||| || Sbjct 2170758 ACCTCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTCACAAAGATCTGCATATT 2170706 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||||| || || || ||||| | || | ||||| ||| || ||||| Sbjct 2171166 ATACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAGTCA 2171107 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | || || | || || ||||||||||| | ||||| ||||| || Sbjct 2171106 GACAGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGATCTGGG 2171047 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || || || |||| || | ||| ||| || ||| | ||| Sbjct 2171046 GGAATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCC 2170987 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||| || || || || || || ||||| ||||| || ||||| Sbjct 2170986 ACCTCCAAAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2170937 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | || || || | || | || | ||||| || || |||||| Sbjct 2173085 ATACCACCTCTGAGGCGCAGGACTAAGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCG 2173026 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | || || || |||||||| | || |||||||| || Sbjct 2173025 GAGAGGGTACGCCCATCCTCAAGCTGCTTGCCAGCAAAAATAAGCCTTTGTTGATCTGGG 2172966 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || || || || | ||| | ||| ||| || || | |||| Sbjct 2172965 GGAATGCCTTCCTTGTCCTGAATCTTAGCTTTCACGTTTTCAATGGTGTCACTGGGCTCA 2172906 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || |||||||| || || || || || ||||| |||||||| Sbjct 2172905 ACCTCAAGGGTAATAGTTTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 2172856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899467496798400