Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq11714 113 1e-19 seq8659 86.0 2e-11 >seq11714 Length=3826745 Score = 113 bits (124), Expect = 1e-19 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688 ||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| Sbjct 1502035 TGTATTCTACAATCTCAGTGCACAGGTTACTGGATTTGATGGTGCCTAAATTCTGCTGGT 1502094 Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748 || || || ||||| ||||| ||||| || ||||| || || |||||||| |||||| Sbjct 1502095 TACTCTTCCTATTACATGCATCTTTGTAGAGCATGTACGGTGTCCCTGTCTCTGTCTGTG 1502154 >seq8659 Length=820556 Score = 86.0 bits (94), Expect = 2e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 304033 TTGGGGTCAGGTGTAATTACAGAGCGAGCACTAAAATCAACACGCTTACCCATAAGATTA 304092 ||||| ||||||||||| |||| |||||| || || |||||||| |||||||||||| Sbjct 289487 TTGGGATCAGGTGTAATAACAGTTCGAGCAGAGAAGTCCACACGCTTGCCCATAAGATTA 289428 Query 304093 CCCCTAACACGACCGCCCTTACCGTTTAGCCTATCCTTGATTGCCTTCAGGGGGCGACCC 304152 || | || | || |||| || ||||| | | |||||| | || || |||||||| Sbjct 289427 CCTCGGACTCTTCCTTCCTTTCCCTTTAGACGCTGCTTGATGGATTTTAGAGGGCGACCA 289368 Query 304153 GA 304154 || Sbjct 289367 GA 289366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471504185640940