Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq11714 113 1e-19
seq8659 86.0 2e-11
>seq11714
Length=3826745
Score = 113 bits (124), Expect = 1e-19
Identities = 97/120 (81%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688
||||||||||||||||| |||||||||| ||||||||||||||||||| |||||
Sbjct 1502035 TGTATTCTACAATCTCAGTGCACAGGTTACTGGATTTGATGGTGCCTAAATTCTGCTGGT 1502094
Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748
|| || || ||||| ||||| ||||| || ||||| || || |||||||| ||||||
Sbjct 1502095 TACTCTTCCTATTACATGCATCTTTGTAGAGCATGTACGGTGTCCCTGTCTCTGTCTGTG 1502154
>seq8659
Length=820556
Score = 86.0 bits (94), Expect = 2e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 304033 TTGGGGTCAGGTGTAATTACAGAGCGAGCACTAAAATCAACACGCTTACCCATAAGATTA 304092
||||| ||||||||||| |||| |||||| || || |||||||| ||||||||||||
Sbjct 289487 TTGGGATCAGGTGTAATAACAGTTCGAGCAGAGAAGTCCACACGCTTGCCCATAAGATTA 289428
Query 304093 CCCCTAACACGACCGCCCTTACCGTTTAGCCTATCCTTGATTGCCTTCAGGGGGCGACCC 304152
|| | || | || |||| || ||||| | | |||||| | || || ||||||||
Sbjct 289427 CCTCGGACTCTTCCTTCCTTTCCCTTTAGACGCTGCTTGATGGATTTTAGAGGGCGACCA 289368
Query 304153 GA 304154
||
Sbjct 289367 GA 289366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471504185640940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |